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NM_000104.4(CYP1B1):c.241T>A (p.Tyr81Asn) AND Primary open angle glaucoma

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Sep 1, 2008
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000008185.16

Allele description [Variation Report for NM_000104.4(CYP1B1):c.241T>A (p.Tyr81Asn)]

NM_000104.4(CYP1B1):c.241T>A (p.Tyr81Asn)

Gene:
CYP1B1:cytochrome P450 family 1 subfamily B member 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
2p22.2
Genomic location:
Preferred name:
NM_000104.4(CYP1B1):c.241T>A (p.Tyr81Asn)
HGVS:
  • NC_000002.12:g.38075148A>T
  • NG_008386.2:g.5954T>A
  • NM_000104.4:c.241T>AMANE SELECT
  • NP_000095.2:p.Tyr81Asn
  • NP_000095.2:p.Tyr81Asn
  • NC_000002.11:g.38302291A>T
  • NM_000104.3:c.241T>A
  • Q16678:p.Tyr81Asn
Protein change:
Y81N; TYR81ASN
Links:
UniProtKB: Q16678#VAR_028736; OMIM: 601771.0017; dbSNP: rs9282671
NCBI 1000 Genomes Browser:
rs9282671
Molecular consequence:
  • NM_000104.4:c.241T>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Primary open angle glaucoma (POAG)
Synonyms:
OPTN-related open angle glaucoma
Identifiers:
MONDO: MONDO:0100553; MedGen: C0339573; OMIM: 137760

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000028392OMIM
no assertion criteria provided
Pathogenic
(Sep 1, 2008)
germlineliterature only

PubMed (2)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

CYP1B1 mutations in French patients with early-onset primary open-angle glaucoma.

Melki R, Colomb E, Lefort N, Brézin AP, Garchon HJ.

J Med Genet. 2004 Sep;41(9):647-51.

PubMed [citation]
PMID:
15342693
PMCID:
PMC1735887

Mutations in CYP1B1 cause primary congenital glaucoma by reduction of either activity or abundance of the enzyme.

Chavarria-Soley G, Sticht H, Aklillu E, Ingelman-Sundberg M, Pasutto F, Reis A, Rautenstrauss B.

Hum Mutat. 2008 Sep;29(9):1147-53. doi: 10.1002/humu.20786.

PubMed [citation]
PMID:
18470941

Details of each submission

From OMIM, SCV000028392.6

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (2)

Description

In 2 unrelated French Caucasian patients with adult-onset primary open angle glaucoma (see 231300), Melki et al. (2004) identified a heterozygous 4046T-A transversion in exon 2 of the CYP1B1 gene, resulting in a tyr81-to-asn (Y81N) substitution. One of the 2 patients, diagnosed with glaucoma at the age of 52 years, had 2 sons heterozygous for the Y81N mutation who had onset of primary open angle glaucoma at 39 and 44 years of age, respectively. No mutation in the MYOC gene (601652) was present.

Chavarria-Soley et al. (2008) analyzed 5 CYP1B1 mutations that had been reported in PCG patients: Y81N, G61E, N203S, L343del, E229K. The G61E, N203S, and L343del mutations had molar enzymatic activity that was less than 10% of that of their respective background haplotype, and there was a significant reduction in microsomal CYP1B1 abundance with the L343del, Y81N, and E229K variants compared to background haplotype. Chavarria-Soley et al. (2008) classified Y81N and E229K as hypomorphic alleles rather than mutations because their relative activity values were intermediate between bona fide mutations and the common haplotype with the lowest activity. The authors proposed that CYP1B1 mutations can act either by reducing enzymatic activity (G61E and N203S), reducing the abundance of the enzyme (Y81N and E229K), or both (L343del), and that mutations that cause a 10-fold or greater reduction in relative activity result in PCG.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 26, 2024