U.S. flag

An official website of the United States government

NM_198437.3(AURKA):c.91T>A (p.Phe31Ile) AND Colon cancer, susceptibility to

Germline classification:
risk factor (1 submission)
Last evaluated:
Aug 1, 2003
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000007021.2

Allele description [Variation Report for NM_198437.3(AURKA):c.91T>A (p.Phe31Ile)]

NM_198437.3(AURKA):c.91T>A (p.Phe31Ile)

Genes:
LOC126863064:BRD4-independent group 4 enhancer GRCh37_chr20:54961142-54962341 [Gene]
AURKA:aurora kinase A [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
20q13.2
Genomic location:
Preferred name:
NM_198437.3(AURKA):c.91T>A (p.Phe31Ile)
HGVS:
  • NC_000020.11:g.56386485A>T
  • NG_012133.1:g.10811T>A
  • NM_001323303.2:c.91T>A
  • NM_001323304.2:c.91T>A
  • NM_001323305.2:c.91T>A
  • NM_003600.4:c.91T>A
  • NM_198433.2:c.91T>A
  • NM_198433.3:c.91T>A
  • NM_198434.3:c.91T>A
  • NM_198435.3:c.91T>A
  • NM_198436.3:c.91T>A
  • NM_198437.3:c.91T>AMANE SELECT
  • NP_001310232.1:p.Phe31Ile
  • NP_001310233.1:p.Phe31Ile
  • NP_001310234.1:p.Phe31Ile
  • NP_003591.2:p.Phe31Ile
  • NP_940835.1:p.Phe31Ile
  • NP_940836.1:p.Phe31Ile
  • NP_940837.1:p.Phe31Ile
  • NP_940838.1:p.Phe31Ile
  • NP_940839.1:p.Phe31Ile
  • NC_000020.10:g.54961541A>T
  • NM_198433.1:c.91T>A
Protein change:
F31I; PHE31ILE
Links:
OMIM: 603072.0001; dbSNP: rs2273535
NCBI 1000 Genomes Browser:
rs2273535
Molecular consequence:
  • NM_001323303.2:c.91T>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001323304.2:c.91T>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001323305.2:c.91T>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_003600.4:c.91T>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_198433.3:c.91T>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_198434.3:c.91T>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_198435.3:c.91T>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_198436.3:c.91T>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_198437.3:c.91T>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Colon cancer, susceptibility to
Identifiers:
MedGen: C4016820

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000027217OMIM
no assertion criteria provided
risk factor
(Aug 1, 2003)
germlineliterature only

PubMed (3)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

The Aurora/Ipl1p kinase family: regulators of chromosome segregation and cytokinesis.

Bischoff JR, Plowman GD.

Trends Cell Biol. 1999 Nov;9(11):454-9. Review.

PubMed [citation]
PMID:
10511710

Tumour amplified kinase STK15/BTAK induces centrosome amplification, aneuploidy and transformation.

Zhou H, Kuang J, Zhong L, Kuo WL, Gray JW, Sahin A, Brinkley BR, Sen S.

Nat Genet. 1998 Oct;20(2):189-93.

PubMed [citation]
PMID:
9771714
See all PubMed Citations (3)

Details of each submission

From OMIM, SCV000027217.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (3)

Description

Ewart-Toland et al. (2003) performed association studies using DNA samples from individuals of northern European ancestry with cancer and matched controls and identified a single SNP that appeared to play a role susceptibility to colon cancer: a T-to-A transversion at position 91 in the AURKA (STK15) coding sequence that resulted in a phe31-to-ile (F31I) substitution. Based on their observation that Aurka in the mouse is a strong candidate gene located in a tumor susceptibility QTL and that it shows evidence of allele-specific changes in mouse tumors, Ewart-Toland et al. (2003) investigated the possibility that allele-specific amplification of the 91A allele of AURKA (encoding the ile31 variant) might also occur in human tumors. The results showed statistically significant allele-specific amplification of the 91A allele in genotyping of DNA samples from 162 individuals for whom both normal colon mucosa and colon tumor DNA was available. The possibility that the results were explained by another gene in linkage disequilibrium (LD) with AURKA was considered highly unlikely, as LD in humans usually extends no more than 100 kb and the other candidate genes, such as ZNF217 (602967) and CYP24A1 (126065), are located much farther away than 100 kb.

The main role of AURKA in tumor development is in controlling chromosome segregation during mitosis (Bischoff and Plowman, 1999). Misregulation of this process results in aneuploidy, a distinctive feature of most cancers, which can be induced by overexpression of AURKA in cell lines (Zhou et al., 1998). Ewart-Toland et al. (2003) found that tumors from individuals carrying the 91A allele showed more evidence of aneuploidy than those from individuals who were homozygous for the common 91T allele. They concluded that individuals with even 1 copy of the AURKA 91A allele develop tumors that have on average a higher degree of aneuploidy than those from individuals homozygous for 91T.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 13, 2024