PGAP4[gene] - ClinVar

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Items: 55

	Variation	Gene (Protein Change)	Type (Consequence)	Condition	Classification, Review status
Select item 160862	GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3	LOC130001537, LOC130001538 +3785 more	Copy number gain	See cases	GPathogenic
Select item 150340	GRCh38/hg38 9p11.2-q34.3(chr9:193412-138159073)x3	LOC130002976, LOC130002977 +3784 more	Copy number gain	See cases	GPathogenic
Select item 150050	GRCh38/hg38 9p24.3-q34.3(chr9:193412-138159073)x3	LOC130001468, LOC130001469 +3785 more	Copy number gain	See cases	GPathogenic
Select item 149828	GRCh38/hg38 9p24.3-q34.3(chr9:193412-138124524)x3	DNAJB5, DNAJB5-DT +3785 more	Copy number gain	See cases	GPathogenic
Select item 59875	GRCh38/hg38 9p24.3-q34.3(chr9:193412-138114463)x3	LOC114827838, LOC116186936 +3785 more	Copy number gain	See cases	GPathogenic
Select item 33205	GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3	LOC124252641, LOC124252642 +3785 more	Copy number gain	See cases	GPathogenic
Select item 153518	GRCh38/hg38 9p24.3-q34.3(chr9:203861-138125937)x3	LOC114022701, LOC114022702 +3785 more	Copy number gain	See cases	GPathogenic
Select item 155409	GRCh38/hg38 9p24.3-q34.3(chr9:203862-138125937)x3	ABCA1, ABCA2 +3785 more	Copy number gain	See cases	GPathogenic
Select item 144309	GRCh38/hg38 9p24.3-q34.3(chr9:204193-138179445)	LOC110120726, LOC110120727 +3785 more	Copy number gain	See cases	GPathogenic
Select item 147624	GRCh38/hg38 9q21.11-31.2(chr9:68420430-106579493)x3	ABCA1, ABHD17B +1072 more	Copy number gain	See cases	GPathogenic
Select item 151006	GRCh38/hg38 9q21.12-31.3(chr9:69627642-111454304)x3	ABCA1, ABHD17B +1188 more	Copy number gain	See cases	GPathogenic
Select item 59881	GRCh38/hg38 9q22.1-32(chr9:88522292-113687796)x3	LOC130002218, LOC130002219 +994 more	Copy number gain	See cases	GPathogenic
Select item 144971	GRCh38/hg38 9q22.32-31.3(chr9:95061030-108695569)x1	LOC130002205, LOC130002206 +417 more	Copy number loss	See cases	GPathogenic
Select item 149230	GRCh38/hg38 9q22.33-31.3(chr9:99024205-109947890)x1	ABCA1, ABITRAM +253 more	Copy number loss	See cases	GPathogenic
Select item 161058	GRCh38/hg38 9q22.33-33.1(chr9:99138048-115011033)x1	LOC126860732, LOC126860733 +514 more	Copy number loss	See cases	GPathogenic
Select item 32222	GRCh38/hg38 9q22.33-33.1(chr9:99138048-115011033)x1	ABCA1, ABITRAM +514 more	Copy number loss	See cases	GPathogenic
Select item 59123	GRCh38/hg38 9q22.33-33.1(chr9:99349916-115767475)x1	CT70, CTNNAL1 +509 more	Copy number loss	See cases	GPathogenic
Select item 3211656	NM_032342.3(PGAP4):c.1183C>T (p.Arg395Trp)	PGAP4, TMEM246-AS1 (R395W)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3211655	NM_032342.3(PGAP4):c.1153G>T (p.Val385Leu)	PGAP4, TMEM246-AS1 (V385L)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2592407	NM_032342.3(PGAP4):c.1060G>C (p.Val354Leu)	PGAP4, TMEM246-AS1 (V354L)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2480560	NM_032342.3(PGAP4):c.1028C>T (p.Ala343Val)	PGAP4, TMEM246-AS1 (A343V)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2482357	NM_032342.3(PGAP4):c.949C>T (p.Arg317Trp)	PGAP4, TMEM246-AS1 (R317W)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3211664	NM_032342.3(PGAP4):c.782G>A (p.Arg261Gln)	PGAP4, TMEM246-AS1 (R261Q)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3211663	NM_032342.3(PGAP4):c.686G>A (p.Arg229Gln)	PGAP4, TMEM246-AS1 (R229Q)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3211662	NM_032342.3(PGAP4):c.520G>T (p.Asp174Tyr)	PGAP4, TMEM246-AS1 (D174Y)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2483585	NM_032342.3(PGAP4):c.466A>C (p.Lys156Gln)	PGAP4, TMEM246-AS1 (K156Q)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3211661	NM_032342.3(PGAP4):c.370C>A (p.Gln124Lys)	PGAP4, TMEM246-AS1 (Q124K)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2594983	NM_032342.3(PGAP4):c.347A>G (p.His116Arg)	PGAP4, TMEM246-AS1 (H116R)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3211660	NM_032342.3(PGAP4):c.319A>G (p.Ile107Val)	PGAP4, TMEM246-AS1 (I107V)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3211659	NM_032342.3(PGAP4):c.299C>T (p.Pro100Leu)	PGAP4, TMEM246-AS1 (P100L)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3211658	NM_032342.3(PGAP4):c.161G>A (p.Arg54His)	PGAP4, TMEM246-AS1 (R54H)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2454815	NM_032342.3(PGAP4):c.134G>A (p.Arg45Gln)	PGAP4, TMEM246-AS1 (R45Q)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2521094	NM_032342.3(PGAP4):c.38G>A (p.Arg13Gln)	PGAP4, TMEM246-AS1 (R13Q)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2614185	NM_032342.3(PGAP4):c.37C>G (p.Arg13Gly)	PGAP4, TMEM246-AS1 (R13G)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3211657	NM_032342.3(PGAP4):c.13A>G (p.Thr5Ala)	PGAP4, TMEM246-AS1 (T5A)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3063071	GRCh37/hg19 9p24.3-q34.3(chr9:203861-141020389)x3	ABCA1, ABCA2 +769 more	Copy number gain	not specified	GPathogenic
Select item 3063058	GRCh37/hg19 9q31.1-31.2(chr9:102606857-109839724)x1	ABCA1, ALDOB +34 more	Copy number loss	not specified	GPathogenic
Select item 2671591	Single allele	CARD19, MIR24-1 +106 more	Deletion	not provided	GPathogenic
Select item 2422164	NC_000009.11:g.(?_104124710)_(104500261_?)del	ZNF189, ALDOB +6 more	Deletion	Hereditary fructosuria	GPathogenic
Select item 1711101	GRCh37/hg19 9p24.3-q34.11(chr9:203861-131603223)x3	ANKS6, ANP32B +596 more	Copy number gain	See cases	GPathogenic
Select item 1703688	GRCh37/hg19 9p22.1-q33.1(chr9:19356861-119513311)	ABCA1, ABHD17B +417 more	Copy number loss	Distal tetrasomy 15q	GUncertain significance
Select item 1527521	GRCh37/hg19 9q21.11-33.2(chr9:71349994-122603410)	ABCA1, ABHD17B +261 more	Copy number gain	not specified	GLikely pathogenic
Select item 1527491	GRCh37/hg19 9p24.3-q34.3(chr9:353349-141020389)	OR1L4, PTRH1 +768 more	Copy number gain	not specified	GPathogenic
Select item 1341973	GRCh37/hg19 9q22.2-31.1(chr9:93864974-106661581)x1	MSANTD3, MSANTD3-TMEFF1 +87 more	Copy number loss	Gorlin syndrome	GPathogenic
Select item 1341248	GRCh37/hg19 9q31.1-31.2(chr9:102858276-110624997)x3	ABCA1, ALDOB +34 more	Copy number gain	not provided	GUncertain significance
Select item 997816	Single allele	PRXL2C, TBC1D2 +55 more	Deletion	Intellectual disability	GPathogenic
Select item 979862	GRCh37/hg19 9q31.1(chr9:103872812-104974365)x3	GRIN3A, ALDOB +6 more	Copy number gain	not provided	GUncertain significance
Select item 929316	GRCh37/hg19 9q22.31-31.2(chr9:96126075-108535272)x1	TSTD2, XPA +84 more	Copy number loss	See cases	GPathogenic
Select item 687100	GRCh37/hg19 9q21.11-34.3(chr9:71416475-141020389)x3	ABCA1, ABCA2 +552 more	Copy number gain	not provided	GPathogenic
Select item 685192	GRCh37/hg19 9p24.3-q34.3(chr9:203861-141020388)x3	ABCA1, ABCA2 +769 more	Copy number gain	not provided	GPathogenic
Select item 523294	GRCh37/hg19 9q21.11-34.3(chr9:71069743-140999928)	SEC16A, SEC61B +553 more	Copy number gain	Hypotonia +2 more	GLikely pathogenic
Select item 443986	GRCh37/hg19 9p24.3-q34.3(chr9:203862-141020389)	ABCA1, ABCA2 +769 more	Copy number gain	See cases	GPathogenic
Select item 395707	GRCh37/hg19 9p24.3-q34.3(chr9:62525-141006407)	UBQLN1, UCK1 +771 more	Copy number gain	See cases	GPathogenic
Select item 394229	GRCh37/hg19 9q31.1-31.3(chr9:103271401-113948226)x1	ABCA1, ABITRAM +48 more	Copy number loss	See cases	GPathogenic
Select item 253402	GRCh37/hg19 9p24.3-q34.3(chr9:163131-141122114)x3	ANGPTL2, ANKRD18A +771 more	Copy number gain	See cases	GPathogenic

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Items: 55