LMF2[gene] - ClinVar - NCBI

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	Variation	Gene (Protein Change)	Type (Consequence)	Condition	Classification, Review status
Select item 144164	GRCh38/hg38 22q11.1-13.33(chr22:16916608-50739836)x3	IL17RA, LINC01640 +2088 more	Copy number gain	See cases	GPathogenic
Select item 145336	GRCh38/hg38 22q11.1-13.33(chr22:16916743-50739785)x3	LOC130067403, LOC130067404 +2088 more	Copy number gain	See cases	GPathogenic
Select item 57942	GRCh38/hg38 22q12.3-13.33(chr22:37061769-50738932)x3	LOC130067651, LOC130067652 +1004 more	Copy number gain	See cases	GPathogenic
Select item 145111	GRCh38/hg38 22q13.1-13.33(chr22:40202014-50735806)x3	LOC130067596, LOC130067597 +687 more	Copy number gain	See cases	GPathogenic
Select item 147775	GRCh38/hg38 22q13.2-13.33(chr22:41871143-50739836)x1	A4GALT, ACR +580 more	Copy number loss	See cases	GPathogenic
Select item 154688	GRCh38/hg38 22q13.2-13.33(chr22:42080077-50739836)x3	LOC126863184, LOC126863185 +541 more	Copy number gain	See cases	GPathogenic
Select item 153178	GRCh38/hg38 22q13.2-13.33(chr22:42380961-50759410)x3	LOC126863187, LOC126863188 +523 more	Copy number gain	See cases	GPathogenic
Select item 57636	GRCh38/hg38 22q13.2-13.33(chr22:42433752-50738932)x1	A4GALT, ACR +521 more	Copy number loss	See cases	GPathogenic
Select item 57944	GRCh38/hg38 22q13.2-13.33(chr22:42599757-50725241)x3	A4GALT, ADM2 +502 more	Copy number gain	See cases	GPathogenic
Select item 57945	GRCh38/hg38 22q13.2-13.33(chr22:42653747-50739836)x3	LOC126863187, LOC126863188 +495 more	Copy number gain	See cases	GPathogenic
Select item 148050	GRCh38/hg38 22q13.2-13.33(chr22:42710276-50739836)x3	CIMAP1B, CPT1B +492 more	Copy number gain	See cases	GPathogenic
Select item 57669	GRCh38/hg38 22q13.2-13.33(chr22:42826246-50739836)x1	LOC130067640, LOC130067641 +483 more	Copy number loss	See cases	GPathogenic
Select item 152914	GRCh38/hg38 22q13.2-13.33(chr22:42837094-50735806)x1	ADM2, ALG12 +481 more	Copy number loss	See cases	GPathogenic
Select item 976862	NC_000022.11:g.43032129_50739836del	CRELD2, DENND6B +471 more	Deletion	Phelan-McDermid syndrome	GPathogenic
Select item 152340	GRCh38/hg38 22q13.2-13.33(chr22:43187980-50745444)x1	ACR, ADM2 +451 more	Copy number loss	See cases	GPathogenic
Select item 976870	NC_000022.11:g.43802117_50806121del	DENND6B, EFCAB6 +443 more	Deletion	Phelan-McDermid syndrome	GPathogenic
Select item 57670	GRCh38/hg38 22q13.31-13.33(chr22:43807366-50739836)x1	ACR, ADM2 +441 more	Copy number loss	See cases	GPathogenic
Select item 146121	GRCh38/hg38 22q13.31-13.33(chr22:43902561-50739836)x1	ACR, ADM2 +434 more	Copy number loss	See cases	GPathogenic
Select item 146895	GRCh38/hg38 22q13.31-13.33(chr22:43992879-50683114)x3	ADM2, ALG12 +428 more	Copy number gain	See cases	GBenign
Select item 976875	NC_000022.11:g.44245760_50806121del	LOC121627953, LOC121627954 +411 more	Deletion	Phelan-McDermid syndrome	GPathogenic
Select item 3062348	GRCh38/hg38 22q13.31-13.33(chr22:44549957-50789329)	CHKB, LOC112695108 +404 more	Copy number loss	Phelan-McDermid syndrome	GPathogenic
Select item 144383	GRCh38/hg38 22q13.31-13.33(chr22:44606363-50739836)x1	ACR, ADM2 +401 more	Copy number loss	See cases	GPathogenic
Select item 976876	NC_000022.11:g.44702479_50806138del	CPT1B, CRELD2 +401 more	Deletion	Phelan-McDermid syndrome	GPathogenic
Select item 57672	GRCh38/hg38 22q13.31-13.33(chr22:44740175-50739836)x1	ACR, ADM2 +396 more	Copy number loss	See cases	GPathogenic
Select item 147743	GRCh38/hg38 22q13.31-13.33(chr22:44764289-50739836)x1	ACR, ADM2 +396 more	Copy number loss	See cases	GPathogenic
Select item 147377	GRCh38/hg38 22q13.31-13.33(chr22:44797239-50739836)x3	ACR, ADM2 +396 more	Copy number gain	See cases	GPathogenic
Select item 57947	GRCh38/hg38 22q13.31-13.33(chr22:44811200-50739836)x3	LOC130067697, LOC130067698 +396 more	Copy number gain	See cases	GPathogenic
Select item 57264	GRCh38/hg38 22q13.31-13.33(chr22:45239376-50739836)x1	ACR, ADM2 +371 more	Copy number loss	See cases	GPathogenic
Select item 57673	GRCh38/hg38 22q13.31-13.33(chr22:45648256-50739836)x1	ACR, ADM2 +343 more	Copy number loss	See cases	GPathogenic
Select item 976865	NC_000022.11:g.45708330_50737364del	TRABD, TRABD-AS1 +338 more	Deletion	Phelan-McDermid syndrome	GPathogenic
Select item 976872	NC_000022.11:g.45819932_50737806del	ADM2, ALG12 +333 more	Deletion	Phelan-McDermid syndrome	GPathogenic
Select item 57398	GRCh38/hg38 22q13.31-13.33(chr22:46065705-50739836)x1	ACR, ADM2 +315 more	Copy number loss	See cases	GPathogenic
Select item 976864	NC_000022.11:g.46269281_50740560del	ACR, ADM2 +295 more	Deletion	Phelan-McDermid syndrome	GPathogenic
Select item 155420	GRCh38/hg38 22q13.31-13.33(chr22:46361165-50759299)x1	LOC130067809, LOC130067810 +288 more	Copy number loss	See cases	GPathogenic
Select item 976873	NC_000022.11:g.46467175_50759338del	LOC130067779, LOC130067780 +281 more	Deletion	Phelan-McDermid syndrome	GPathogenic
Select item 976869	NC_000022.11:g.46489644_50806138del	LOC126863185, LOC126863186 +282 more	Deletion	Phelan-McDermid syndrome	GPathogenic
Select item 152137	GRCh38/hg38 22q13.31-13.33(chr22:46732445-50780522)x1	ACR, ADM2 +260 more	Copy number loss	See cases	GPathogenic
Select item 146310	GRCh38/hg38 22q13.31-13.33(chr22:46919818-50739836)x1	LOC130067846, LOC130067847 +240 more	Copy number loss	See cases	GPathogenic
Select item 57674	GRCh38/hg38 22q13.31-13.33(chr22:47122613-50739836)x1	LOC126863173, LOC126863174 +235 more	Copy number loss	See cases	GPathogenic
Select item 57675	GRCh38/hg38 22q13.31-13.33(chr22:47234701-50739836)x1	ACR, ADM2 +230 more	Copy number loss	See cases	GPathogenic
Select item 976868	NC_000022.11:g.47447433_50806138del	LOC126863188, LOC129391286 +228 more	Deletion	Phelan-McDermid syndrome	GPathogenic
Select item 976863	NC_000022.11:g.47513236_50806138del	ACR, ADM2 +226 more	Deletion	Phelan-McDermid syndrome	GPathogenic
Select item 976866	NC_000022.11:g.47705262_50739836del	LOC130067774, LOC130067775 +221 more	Deletion	Phelan-McDermid syndrome	GPathogenic
Select item 57193	GRCh38/hg38 22q13.31-13.33(chr22:47705262-50739836)x1	ACR, ADM2 +221 more	Copy number loss	See cases	GPathogenic
Select item 976861	NC_000022.11:g.47823120_50759410del	LOC130067781, LOC130067782 +221 more	Deletion	Phelan-McDermid syndrome	GPathogenic
Select item 57701	GRCh38/hg38 22q13.32-13.33(chr22:48138038-50739836)x1	ACR, ADM2 +211 more	Copy number loss	See cases	GPathogenic
Select item 154522	GRCh38/hg38 22q13.32-13.33(chr22:48241375-50739836)x1	ACR, ADM2 +210 more	Copy number loss	See cases	GPathogenic
Select item 976871	NC_000022.11:g.48500337_50739785del	ACR, ADM2 +206 more	Deletion	Phelan-McDermid syndrome	GPathogenic
Select item 976867	NC_000022.11:g.48500344_50780581del	LOC126863183, LOC126863184 +207 more	Deletion	Phelan-McDermid syndrome	GPathogenic
Select item 148302	GRCh38/hg38 22q13.32-13.33(chr22:48500344-50780581)x1	ACR, ADM2 +207 more	Copy number loss	See cases	GPathogenic
Select item 147807	GRCh38/hg38 22q13.32-13.33(chr22:48614336-50739836)x1	ACR, ADM2 +204 more	Copy number loss	See cases	GPathogenic
Select item 57703	GRCh38/hg38 22q13.32-13.33(chr22:48654672-50739836)x1	ACR, ADM2 +204 more	Copy number loss	See cases	GPathogenic
Select item 976874	NC_000022.11:g.49181210_50759297del	DENND6B, HDAC10 +190 more	Deletion	Phelan-McDermid syndrome	GPathogenic
Select item 144225	GRCh38/hg38 22q13.33(chr22:49315518-50739836)x1	ACR, ADM2 +186 more	Copy number loss	See cases	GPathogenic
Select item 144377	GRCh38/hg38 22q13.33(chr22:49378128-50739836)x1	ACR, ADM2 +185 more	Copy number loss	See cases	GPathogenic
Select item 57704	GRCh38/hg38 22q13.33(chr22:49395349-50738932)x1	ACR, ADM2 +185 more	Copy number loss	See cases	GPathogenic
Select item 146391	GRCh38/hg38 22q13.33(chr22:49504768-50780581)x1	ACR, ADM2 +185 more	Copy number loss	See cases	GPathogenic
Select item 155641	GRCh38/hg38 22q13.33(chr22:49529760-50759410)x1	LOC121853048, LOC125446259 +184 more	Copy number loss	See cases	GPathogenic
Select item 150859	GRCh38/hg38 22q13.33(chr22:49535113-50780581)x1	ACR, ADM2 +185 more	Copy number loss	See cases	GPathogenic
Select item 2579283	GRCh38/hg38 22q13.33(chr22:49757859-50740457)x1	ACR, ADM2 +178 more	Copy number loss	Phelan-McDermid syndrome	GPathogenic
Select item 1703238	Single allele	ACR, LOC130067783 +166 more	Duplication	Chromosome 22q13 duplication syndrome	GPathogenic
Select item 1679643	Single allele	LOC130067853, LOC130067854 +117 more	Duplication	not provided	GUncertain significance
Select item 146870	GRCh38/hg38 22q13.33(chr22:50055303-50677724)x3	ADM2, ARSA +123 more	Copy number gain	See cases	GUncertain significance
Select item 151373	GRCh38/hg38 22q13.33(chr22:50149563-50780522)x1	ACR, ADM2 +124 more	Copy number loss	See cases	GPathogenic
Select item 147719	GRCh38/hg38 22q13.33(chr22:50274967-50739836)x3	ACR, ADM2 +84 more	Copy number gain	See cases	GBenign
Select item 160981	GRCh38/hg38 22q13.33(chr22:50368887-50599372)x3	ADM2, CHKB +52 more	Copy number gain	See cases	GUncertain significance
Select item 32818	GRCh38/hg38 22q13.33(chr22:50368887-50599372)x3	ADM2, CHKB +52 more	Copy number gain	See cases	GUncertain significance
Select item 154200	GRCh38/hg38 22q13.33(chr22:50485457-50759410)x1	ACR, ADM2 +55 more	Copy number loss	See cases	GPathogenic
Select item 2314224	NM_033200.3(LMF2):c.2120A>G (p.Lys707Arg)	LMF2 (K682R +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2330007	NM_033200.3(LMF2):c.2116A>C (p.Lys706Gln)	LMF2 (K681Q +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2511902	NM_033200.3(LMF2):c.2114G>A (p.Arg705Gln)	LMF2 (R680Q +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2216978	NM_033200.3(LMF2):c.2110C>T (p.Arg704Trp)	LMF2 (R679W +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2289925	NM_033200.3(LMF2):c.2108C>A (p.Thr703Asn)	LMF2 (T703N +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2478060	NM_033200.3(LMF2):c.2104A>C (p.Thr702Pro)	LMF2 (T702P +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2458754	NM_033200.3(LMF2):c.2092A>G (p.Ser698Gly)	LMF2 (S698G +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2592927	NM_033200.3(LMF2):c.2071G>A (p.Ala691Thr)	LMF2 (A666T +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2278565	NM_033200.3(LMF2):c.2047G>A (p.Gly683Arg)	LMF2 (G658R +1 more)	Single nucleotide variant (missense variant)	not provided +1 more	GUncertain significance
Select item 2388080	NM_033200.3(LMF2):c.2027C>T (p.Pro676Leu)	LMF2 (P651L +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2252428	NM_033200.3(LMF2):c.2021G>T (p.Arg674Leu)	LMF2 (R649L +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2204237	NM_033200.3(LMF2):c.2015A>G (p.Glu672Gly)	LMF2 (E647G +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2521100	NM_033200.3(LMF2):c.2011G>A (p.Gly671Arg)	LMF2 (G646R +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3119286	NM_033200.3(LMF2):c.2003C>T (p.Pro668Leu)	LMF2 (P643L +1 more)	Single nucleotide variant (missense variant)	not specified	GLikely benign
Select item 2230616	NM_033200.3(LMF2):c.1994C>T (p.Pro665Leu)	LMF2 (P640L +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2602175	NM_033200.3(LMF2):c.1985G>A (p.Arg662Gln)	LMF2 (R662Q +1 more)	Single nucleotide variant (missense variant)	not specified	GLikely benign
Select item 2231457	NM_033200.3(LMF2):c.1940G>A (p.Gly647Glu)	LMF2 (G647E +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3119285	NM_033200.3(LMF2):c.1931T>A (p.Met644Lys)	LMF2 (M619K +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2340340	NM_033200.3(LMF2):c.1918T>C (p.Trp640Arg)	LMF2 (W640R +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2209378	NM_033200.3(LMF2):c.1909G>A (p.Ala637Thr)	LMF2 (A637T +1 more)	Single nucleotide variant (missense variant)	not specified	GLikely benign
Select item 3119284	NM_033200.3(LMF2):c.1897C>G (p.Leu633Val)	LMF2 (L608V +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2621685	NM_033200.3(LMF2):c.1894C>A (p.Pro632Thr)	LMF2 (P607T +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2391143	NM_033200.3(LMF2):c.1838G>A (p.Arg613His)	LMF2 (R613H +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2211267	NM_033200.3(LMF2):c.1837C>T (p.Arg613Cys)	LMF2 (R613C +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3119283	NM_033200.3(LMF2):c.1795C>T (p.Leu599Phe)	LMF2 (L599F +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2284892	NM_033200.3(LMF2):c.1781C>T (p.Thr594Met)	LMF2 (T594M +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3119282	NM_033200.3(LMF2):c.1762G>C (p.Val588Leu)	LMF2 (V563L +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2352487	NM_033200.3(LMF2):c.1756C>T (p.Pro586Ser)	LMF2 (P586S +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3119281	NM_033200.3(LMF2):c.1730G>A (p.Arg577Gln)	LMF2 (R577Q +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2356048	NM_033200.3(LMF2):c.1730G>T (p.Arg577Leu)	LMF2 (R577L +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3119280	NM_033200.3(LMF2):c.1712A>G (p.Glu571Gly)	LMF2 (E571G +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3119279	NM_033200.3(LMF2):c.1685A>G (p.Tyr562Cys)	LMF2 (Y562C +1 more)	Single nucleotide variant (missense variant)	not specified	GUncertain significance

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