| | A3GALT2, ACOT11 +1226 more | Inversion | Bilateral polymicrogyria | |
| | | Copy number gain | See cases | |
| | | Copy number gain | See cases | |
| | | Duplication | Muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B3 +1 more | |
| | | Single nucleotide variant (synonymous variant +1 more) | Retinal dystrophy | |
| | | Single nucleotide variant (nonsense +1 more) | Muscle eye brain disease | |
| | | Deletion (frameshift variant +1 more) | Muscle eye brain disease | |
| | TSPAN1, POMGNT1 (T703I +1 more) | Single nucleotide variant (missense variant +1 more) | not provided | |
| | | Single nucleotide variant (nonsense +1 more) | Muscle eye brain disease | |
| | | Single nucleotide variant (nonsense +1 more) | Muscle eye brain disease | |
| | | Single nucleotide variant (3 prime UTR variant +1 more) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 +3 more | |
| | | Single nucleotide variant (missense variant +1 more) | not provided +2 more | GConflicting classifications of pathogenicity |
| | | Duplication (frameshift variant +1 more) | Muscle eye brain disease | |
| | | Deletion (inframe_deletion +1 more) | Muscle eye brain disease | |
| | | Single nucleotide variant (synonymous variant +1 more) | not provided | |
| | | Single nucleotide variant (synonymous variant +1 more) | POMGNT1-related disorder | |
| | POMGNT1, TSPAN1 (G634D +1 more) | Single nucleotide variant (missense variant +1 more) | Retinal dystrophy | |
| | | Single nucleotide variant (3 prime UTR variant +1 more) | not provided +2 more | GConflicting classifications of pathogenicity |
| | | Single nucleotide variant (intron variant +1 more) | Congenital Muscular Dystrophy, alpha-dystroglycan related +1 more | |
| | | Single nucleotide variant (3 prime UTR variant +1 more) | Congenital Muscular Dystrophy, alpha-dystroglycan related +2 more | GConflicting classifications of pathogenicity |
| | | Deletion (3 prime UTR variant +1 more) | Muscle eye brain disease | |
| | | Deletion (frameshift variant +1 more) | Autism spectrum disorder | |
| | | Microsatellite (inframe_deletion +1 more) | Muscle eye brain disease | |
| | | Single nucleotide variant (missense variant +1 more) | not provided | |
| | | Single nucleotide variant (missense variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | POMGNT1, TSPAN1 (T660I +2 more) | Single nucleotide variant (synonymous variant +1 more) | not provided +2 more | |
| | | Single nucleotide variant (missense variant +2 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | TSPAN1, POMGNT1 (Q516* +3 more) | Single nucleotide variant (missense variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Duplication (inframe_insertion) | Muscle eye brain disease | |
| | POMGNT1, TSPAN1 (P635L +2 more) | Single nucleotide variant (synonymous variant +2 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | POMGNT1, TSPAN1 (P511L +2 more) | Single nucleotide variant (synonymous variant +1 more) | not provided | |
| | | Single nucleotide variant (missense variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (missense variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (missense variant +1 more) | Muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B3 +1 more | |
| | POMGNT1, TSPAN1 (G642* +3 more) | Single nucleotide variant (nonsense +2 more) | Inborn genetic diseases | |
| | POMGNT1, TSPAN1 (E507D +3 more) | Single nucleotide variant (missense variant) | Muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B3 +1 more | |
| | | Single nucleotide variant (missense variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | POMGNT1, TSPAN1 (E507K +3 more) | Single nucleotide variant (missense variant) | not provided | |
| | POMGNT1, TSPAN1 (K649N +3 more) | Single nucleotide variant (nonsense +1 more) | Muscle eye brain disease | |
| | POMGNT1, TSPAN1 (K506Q +3 more) | Single nucleotide variant (missense variant) | Muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B3 +1 more | |
| | POMGNT1, TSPAN1 (E507fs +3 more) | Duplication (frameshift variant) | not specified | |
| | POMGNT1, TSPAN1 (P504S +3 more) | Single nucleotide variant (missense variant) | Muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B3 +1 more | |
| | POMGNT1, TSPAN1 (P625A +3 more) | Single nucleotide variant (missense variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | POMGNT1, TSPAN1 (P503S +3 more) | Single nucleotide variant (missense variant) | Muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B3 +1 more | |
| | | Single nucleotide variant (missense variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | POMGNT1, TSPAN1 (G636A +3 more) | Single nucleotide variant (missense variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +2 more | |
| | | Single nucleotide variant (missense variant +2 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (missense variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (missense variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | POMGNT1, TSPAN1 (F500fs +3 more) | Deletion (frameshift variant) | Muscle eye brain disease | |
| | POMGNT1, TSPAN1 (F643V +3 more) | Single nucleotide variant (missense variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +6 more | |
| | | Single nucleotide variant (missense variant +2 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | POMGNT1, TSPAN1 (I642F +3 more) | Single nucleotide variant (missense variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +3 more | |
| | POMGNT1, TSPAN1 (I642V +3 more) | Single nucleotide variant (missense variant) | Inborn genetic diseases +3 more | |
| | | Single nucleotide variant (missense variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (missense variant +1 more) | not provided +2 more | GConflicting classifications of pathogenicity |
| | POMGNT1, TSPAN1 (T497I +2 more) | Single nucleotide variant (synonymous variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (missense variant +2 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (missense variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (missense variant +1 more) | Muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B3 +1 more | |
| | POMGNT1, TSPAN1 (S616L +2 more) | Single nucleotide variant (synonymous variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (missense variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (missense variant +1 more) | not provided | |
| | POMGNT1, TSPAN1 (P615L +2 more) | Single nucleotide variant (synonymous variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | POMGNT1, TSPAN1 (P636S +3 more) | Single nucleotide variant (missense variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | POMGNT1, TSPAN1 (K492fs +3 more) | Deletion (frameshift variant) | Muscle eye brain disease | |
| | POMGNT1, TSPAN1 (S624R +3 more) | Single nucleotide variant (missense variant) | Muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B3 +1 more | |
| | POMGNT1, TSPAN1 (V633M +3 more) | Single nucleotide variant (missense variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (splice acceptor variant +1 more) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | | Single nucleotide variant (intron variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (intron variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (intron variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (intron variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (intron variant) | Muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B3 +1 more | |
| | | Single nucleotide variant (intron variant) | Muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B3 +1 more | |
| | | Single nucleotide variant (intron variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (intron variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (intron variant) | not specified | |
| | | Single nucleotide variant (intron variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (intron variant) | not specified +3 more | |
| | | Insertion (intron variant) | Muscle eye brain disease | |
| | | Single nucleotide variant (intron variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (intron variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (intron variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (intron variant) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Microsatellite (intron variant +1 more) | Muscle eye brain disease | |
| | | Single nucleotide variant (intron variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +2 more | GPathogenic/Likely pathogenic |
| | | Single nucleotide variant (intron variant +1 more) | Myopathy caused by variation in POMGNT1 +7 more | GPathogenic/Likely pathogenic |
| | | Single nucleotide variant (intron variant +1 more) | Muscular dystrophy-dystroglycanopathy +4 more | GPathogenic/Likely pathogenic |
| | POMGNT1, TSPAN1 (S632* +2 more) | Single nucleotide variant (nonsense +1 more) | Muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B3 +2 more | GConflicting classifications of pathogenicity |
| | | Single nucleotide variant (synonymous variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | POMGNT1, TSPAN1 (P487R +2 more) | Single nucleotide variant (missense variant +1 more) | not provided +4 more | GConflicting classifications of pathogenicity |
| | POMGNT1, TSPAN1 (P487S +2 more) | Single nucleotide variant (missense variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | | Single nucleotide variant (synonymous variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | POMGNT1, TSPAN1 (P627L +2 more) | Single nucleotide variant (missense variant +1 more) | Muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B3 +1 more | |
| | | Single nucleotide variant (synonymous variant +1 more) | Congenital Muscular Dystrophy, alpha-dystroglycan related +2 more | GConflicting classifications of pathogenicity |
| | POMGNT1, TSPAN1 (V483I +2 more) | Single nucleotide variant (missense variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | POMGNT1, TSPAN1 (V483fs +2 more) | Deletion (frameshift variant +1 more) | Retinitis pigmentosa 76 +4 more | GPathogenic/Likely pathogenic |
| | | Single nucleotide variant (synonymous variant +1 more) | Autosomal recessive limb-girdle muscular dystrophy type 2O +1 more | |
| | POMGNT1, TSPAN1 (M623L +2 more) | Single nucleotide variant (missense variant) | not provided +2 more | |