| | ILRUN-AS1, IP6K3 +2582 more | Copy number gain | See cases | |
| | LOC129996415, LOC129996416 +435 more | Copy number loss | See cases | |
| | LOC132089395, LOC132089396 +324 more | Copy number loss | See cases | |
| | | Copy number gain | See cases | |
| | CLIC5, LOC109611589 +22 more | Copy number gain | See cases | |
| | LOC109611593, RUNX2 +1 more | Single nucleotide variant (5 prime UTR variant +2 more) | Cleidocranial dysostosis | |
| | LOC109611593, RUNX2 +1 more | Single nucleotide variant (intron variant) | not provided | |
| | LOC109611593, RUNX2 +1 more | Single nucleotide variant (intron variant) | Cleidocranial dysostosis | |
| | | Single nucleotide variant (5 prime UTR variant +2 more) | not provided | |
| | | Single nucleotide variant (5 prime UTR variant +2 more) | Cleidocranial dysostosis | |
| | | Single nucleotide variant (5 prime UTR variant +2 more) | Cleidocranial dysostosis | |
| | | Deletion (5 prime UTR variant +2 more) | Cleidocranial dysostosis +1 more | |
| | | Single nucleotide variant (missense variant +3 more) | not provided | |
| | | Single nucleotide variant (missense variant +2 more) | not provided | |
| | | Duplication (frameshift variant +2 more) | Cleidocranial dysostosis | |
| | | Single nucleotide variant (missense variant +2 more) | not provided | |
| | | Single nucleotide variant (missense variant +2 more) | Inborn genetic diseases | |
| | | Single nucleotide variant (synonymous variant +2 more) | Cleidocranial dysostosis | |
| | | Single nucleotide variant (intron variant) | not provided | |
| | | Single nucleotide variant (intron variant) | not provided | |
| | | Single nucleotide variant (intron variant) | not provided | |
| | | Single nucleotide variant (intron variant) | not provided | |
| | LOC109611589, LOC129996578 +2 more | Duplication | Metaphyseal dysplasia-maxillary hypoplasia-brachydacty syndrome | |
| | | Deletion (intron variant) | not provided | |
| | | Single nucleotide variant (intron variant) | not provided | |
| | | Single nucleotide variant (intron variant) | not provided | |
| | | Single nucleotide variant (intron variant) | not provided | |
| | | Single nucleotide variant (5 prime UTR variant +1 more) | not provided | |
| | | Single nucleotide variant (missense variant +1 more) | not provided | |
| | | Single nucleotide variant (missense variant +1 more) | not provided | |
| | | Single nucleotide variant (synonymous variant +1 more) | not provided | |
| | | Single nucleotide variant (missense variant) | Inborn genetic diseases | |
| | | Single nucleotide variant (synonymous variant) | not provided | |
| | | Single nucleotide variant (synonymous variant) | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Duplication (frameshift variant) | not provided | |
| | | Deletion (frameshift variant) | Cleidocranial dysostosis | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (synonymous variant) | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | Inborn genetic diseases | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | Inborn genetic diseases +2 more | GConflicting classifications of pathogenicity |
| | | Duplication (frameshift variant) | not provided | |
| | | Duplication (inframe_insertion) | not provided | |
| | | Microsatellite (inframe_deletion) | not provided | |
| | | Deletion (inframe_deletion) | not specified | |
| | | Microsatellite (inframe_insertion) | Cleidocranial dysostosis +1 more | |
| | | Deletion (inframe_deletion +1 more) | not provided | |
| | LOC109611589, RUNX2 (Q36* +1 more) | Single nucleotide variant (nonsense) | not provided | |
| | | Microsatellite (inframe_deletion) | not provided | |
| | LOC109611589, RUNX2 (Q51K +1 more) | Single nucleotide variant (missense variant) | not specified +1 more | GConflicting classifications of pathogenicity |
| | | Single nucleotide variant (synonymous variant) | not provided | |
| | | Duplication (inframe_insertion +1 more) | not provided | |
| | | Single nucleotide variant (synonymous variant) | not provided | |
| | | Microsatellite (inframe_insertion +1 more) | not provided | |
| | | Microsatellite (inframe_insertion) | not provided | |
| | | Deletion (inframe_deletion +1 more) | not provided | |
| | | Microsatellite (inframe_deletion) | not specified +1 more | GConflicting classifications of pathogenicity |
| | | Duplication (inframe_insertion) | not provided | GConflicting classifications of pathogenicity |
| | LOC109611589, RUNX2 (Q55* +1 more) | Single nucleotide variant (nonsense) | not provided | |
| | | Deletion (inframe_deletion +1 more) | not provided | |
| | LOC109611589, RUNX2 (Q44fs +1 more) | Deletion (frameshift variant) | Cleidocranial dysostosis | |
| | | Microsatellite (inframe_insertion +1 more) | not provided | |
| | | Microsatellite (inframe_insertion +1 more) | not provided | |
| | | Microsatellite (inframe_insertion) | not provided | |
| | | Microsatellite (inframe_insertion) | not provided | GConflicting classifications of pathogenicity |
| | | Single nucleotide variant (synonymous variant) | not provided | |
| | | Microsatellite (inframe_insertion) | not provided | |
| | LOC109611589, RUNX2 (Q57del +1 more) | Microsatellite (inframe_indel) | RUNX2-related disorder | |
| | | Deletion (inframe_deletion) | not provided | |
| | LOC109611589, RUNX2 (Q45R +1 more) | Single nucleotide variant (missense variant) | Cleidocranial dysostosis +1 more | GConflicting classifications of pathogenicity |
| | | Single nucleotide variant (synonymous variant) | not provided | |
| | | Duplication (inframe_insertion) | not provided | |
| | LOC109611589, RUNX2 (Q62* +1 more) | Single nucleotide variant (nonsense) | not provided | |
| | | Single nucleotide variant (synonymous variant) | not provided | |
| | LOC109611589, RUNX2 (Q49* +1 more) | Single nucleotide variant (nonsense) | not provided | |
| | LOC109611589, RUNX2 (E72fs +1 more) | Indel (frameshift variant) | Cleidocranial dysostosis | |
| | LOC109611589, RUNX2 (Q50* +1 more) | Single nucleotide variant (nonsense) | not provided | |
| | LOC109611589, RUNX2 (Q50R +1 more) | Single nucleotide variant (missense variant) | not provided | |
| | | Deletion (inframe_deletion +1 more) | not provided | |
| | | Deletion (inframe_deletion +1 more) | not provided | |
| | | Microsatellite (inframe_insertion) | not provided | |
| | | Single nucleotide variant (synonymous variant) | not provided +1 more | |
| | | Microsatellite (inframe_deletion +1 more) | not provided | |
| | LOC109611589, RUNX2 (Q66* +1 more) | Single nucleotide variant (nonsense) | not provided | |
| | LOC109611589, RUNX2 (Q53* +1 more) | Single nucleotide variant (nonsense) | not provided | |
| | LOC109611589, RUNX2 (Q53fs +1 more) | Deletion (frameshift variant) | not provided | |
| | LOC109611589, RUNX2 (E58fs +1 more) | Insertion (frameshift variant) | not provided | |
| | | Single nucleotide variant (synonymous variant) | not specified | |
| | LOC109611589, RUNX2 (Q54fs +1 more) | Indel (frameshift variant) | Cleidocranial dysostosis | |
| | LOC109611589, RUNX2 (Q55* +1 more) | Single nucleotide variant (nonsense) | not provided | |
| | LOC109611589, RUNX2 (Q56H +1 more) | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (synonymous variant) | not provided | |
| | | Microsatellite (inframe_insertion +1 more) | not provided | |
| | LOC109611589, RUNX2 (Q57* +1 more) | Single nucleotide variant (nonsense) | not provided +1 more | |