Table 1PubChem Assay Summaries for Probe project

PubChemBioAssay NameAIDProbe TypeAssay TypeAssay FormatAssay Detection & well format
Summary assay for the identification of compounds that inhibit NOD1 [Summary]1575InhibitorSummaryN/AN/A
uHTS luminescence assay for the identification of compounds that inhibit NOD1 [Confirmatory]1578InhibitorPrimaryCell- basedluminescence & 1536
uHTS luminescence assay for the identification of compounds that inhibit NOD2 [Confirmatory]1566InhibitorCounterscreen for NOD1 (also NOD2 Primary)Cell- basedluminescence & 1536
HTS assay for identification of inhibitors of TNFα-specific NF-κB induction1852InhibitorCounterscreenCell- basedluminescence & 1536
uHTS Fluorescence assay for the identification of cytotoxic compounds among compounds active in NOD1 cell inhibition assay [Confirmatory]1849InhibitorCytotoxicity CounterscreenCell- basedluminescence & 1536
uHTS luminescence assay for the identification of compounds that inhibit NOD2 in MDP treated cells. [Confirmatory]2001InhibitorCounterscreenCell- basedluminescence & 1536
SAR analysis of compounds that inhibit NOD1 [Confirmatory]2333InhibitorSARCell- basedLuminescence & 384
SAR analysis of compounds that inhibit NOD1 – Set 2 [Confirmatory]2466InhibitorSARCell- basedLuminescence & 384
SAR analysis of compounds that inhibit NOD2 [Confirmatory]2334InhibitorSARCell- basedLuminescence & 384
SAR analysis of compounds that inhibit NOD2 – Set 2 [Confirmatory]2475InhibitorSARCell- basedLuminescence & 384
SAR analysis of inhibitors of TNFα specific NF- κB induction [Confirmatory]2337InhibitorSAR CounterscreenCell- basedLuminescence & 1536
SAR analysis of inhibitors of TNFα specific NF- κB induction – Set 2 [Confirmatory]2483InhibitorSAR CounterscreenCell- basedLuminescence & 1536
SAR analysis of compounds that are cytotoxic to HEK293 [Confirmatory]2335InhibitorSAR Cytotoxicity CounterscreenCell- basedluminescence & 1536
SAR analysis of compounds that are cytotoxic to HEK293 – Set 2 [Confirmatory]2335InhibitorSAR Cytotoxicity CounterscreenCell- basedluminescence & 1536
SAR analysis of muramyl dipeptide (MDP) induced IL-8 secretion in MCF-7/NOD2 cells.– Set 2 [Confirmatory]]2503InhibitorSecondary Assay for specificityCell- basedAbsorbance (at 450 nm) & 96
SAR analysis of tumor necrosis factor alpha (TNFαlpha) induced IL-8 secretion in MCF- 7/NOD1 cells – Set 2 [Confirmatory]2504InhibitorSecondary Assay for specificityCell- basedAbsorbance (ELISA) of cell extracts & 96
SAR analysis of GM-Tri-DAP induced IL-8 secretion in MCF-7/NOD1 cells – Set 2 [Confirmatory]2505InhibitorSecondary Assay for specificityCell- basedAbsorbance (ELISA) of cell extracts & 96
SAR analysis of NF-κB dependent luciferase using DAP as an inducer – Set 2 [Confirmatory]2793InhibitorSecondary Assay for specificityCell- basedluminescence & 96
SAR analysis of NF-κB dependent luciferase using PMA/Ionomycin as an inducer – Set 2 [Confirmatory]2792InhibitorSecondary Assay for specificityCell- basedluminescence & 96
SAR analysis of NF-κB dependent luciferase using Doxorucibin as an inducer – Set 2 [Confirmatory]2789InhibitorSecondary Assay for specificityCell- basedluminescence & 96

From: High Throughput Screening Assays for NOD1 Inhibitors - Probe 2

Cover of Probe Reports from the NIH Molecular Libraries Program
Probe Reports from the NIH Molecular Libraries Program [Internet].

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