Table 5.

PHOX2B GCN Expansion Technical Considerations

Technical IssueComment [Reference]
Sequence of repeatThe polyalanine repeat comprises any 1 of 4 codon combinations — GCA, GCT, GCC, or GCG – & is referred to as GCN.
Methods to detect expanded alleleSanger sequencing
Repeat interruptionsNone reported. See Sequence of repeat Comment (above) for variability in codon sequence.
Somatic instabilityNot reported
Germline instabilityRepeat stability during parent-to-child transmission, incl instances of parental mosaicism for the expansion, has been consistently observed [Weese-Mayer et al 2003, Trochet et al 2005, Weese-Mayer et al 2005, Antic et al 2006].

From: Congenital Central Hypoventilation Syndrome

Cover of GeneReviews®
GeneReviews® [Internet].
Adam MP, Feldman J, Mirzaa GM, et al., editors.
Seattle (WA): University of Washington, Seattle; 1993-2024.
Copyright © 1993-2024, University of Washington, Seattle. GeneReviews is a registered trademark of the University of Washington, Seattle. All rights reserved.

GeneReviews® chapters are owned by the University of Washington. Permission is hereby granted to reproduce, distribute, and translate copies of content materials for noncommercial research purposes only, provided that (i) credit for source (http://www.genereviews.org/) and copyright (© 1993-2024 University of Washington) are included with each copy; (ii) a link to the original material is provided whenever the material is published elsewhere on the Web; and (iii) reproducers, distributors, and/or translators comply with the GeneReviews® Copyright Notice and Usage Disclaimer. No further modifications are allowed. For clarity, excerpts of GeneReviews chapters for use in lab reports and clinic notes are a permitted use.

For more information, see the GeneReviews® Copyright Notice and Usage Disclaimer.

For questions regarding permissions or whether a specified use is allowed, contact: ude.wu@tssamda.

NCBI Bookshelf. A service of the National Library of Medicine, National Institutes of Health.