MIGS Cultured Bacterial/Archaeal sample from Betap... - BioSample - NCBI

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MIGS Cultured Bacterial/Archaeal sample from Betaproteobacteria bacterium HGW-Betaproteobacteria-12

Identifiers: BioSample: SAMN06767604; Sample name: HGW-Betaproteobacteria-12

Organism: Betaproteobacteria bacterium HGW-Betaproteobacteria-12
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; unclassified Betaproteobacteria

Package: MIGS: cultured bacteria/archaea, water; version 6.0

Attributes

isolation and growth condition	missing
geographic location	Japan: Horonobe URL
environmental medium	ground water
sample type	metagenomic assembly
reference for biomaterial	missing
collection date	2014
isolate	HGW-Betaproteobacteria-12
isolation source	groundwater
latitude and longitude	45.045278 N 141.859444 E
strain	missing
depth	250m
number of replicons	missing
local-scale environmental context	Sedimentary rocks
metagenome source	groundwater metagenome
broad-scale environmental context	Underground
environmental-sample	TRUE
note	This biosample is a metagenomic assembly obtained from the metagenome sample SAMN04999997
metagenomic	TRUE

Description

This biosample is a metagenomic assembly obtained from the metagenome sample SAMN04999997

Keywords: GSC:MIxS;MIGS:6.0

BioProject: PRJNA321556 groundwater metagenome
Retrieve all samples from this project

Submission: UC Berkeley, David McGrath; 2017-04-19

Accession:: SAMN06767604
ID:: 6767604

BioProject Nucleotide

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MIGS Cultured Bacterial/Archaeal sample from Betaproteobacteria bacterium HGW-Be...
MIGS Cultured Bacterial/Archaeal sample from Betaproteobacteria bacterium HGW-Betaproteobacteria-12

biosample
BioSample links for Nucleotide (Select 1308983834) (1)
BioSample
Protein Links for Nucleotide (Select 1308983925) (78)
Protein
N-6 DNA methylase [Erwinia typographi]
N-6 DNA methylase [Erwinia typographi]
gi|736899692|ref|WP_034898618.1|

Protein
MAG: Betaproteobacteria bacterium HGW-Betaproteobacteria-12 bjp_ig2158_scaffold_...
MAG: Betaproteobacteria bacterium HGW-Betaproteobacteria-12 bjp_ig2158_scaffold_107, whole genome shotgun sequence
gi|1308984926|gb|PHCU01000004.1||gn :PHCU01|bjp_ig2158_scaffold_107

Nucleotide

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