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MIGS Cultured Bacterial/Archaeal sample from Bacteroides acidifaciens

Identifiers
BioSample: SAMN10878312; Sample name: Bacteroides acidifaciens isolate NM70_E10; SRA: SRS4700348
Organism
Bacteroides acidifaciens
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
Package
MIGS: cultured bacteria/archaea, host-associated; version 6.0
Attributes
strainNM70_E10
collection date2016
broad-scale environmental contextNot applicable
local-scale environmental contextNot applicable
environmental mediumNot applicable
geographic locationCanada: Toronto
hostMus musculus
isolation and growth conditionnot applicable
latitude and longitudenot applicable
number of repliconsnot applicable
reference for biomaterialmissing
estimated size4853335
extrachromosomal elementsMissing
host age9 weeks
host body habitatcolon and cecum
host diseasecolon cancer, Lynch syndrome
host genotypeC57BL/6 APCmin/+ Msh2-/-
host phenotypecolitis and polyposis
host taxonomy ID10090 (10090)
isolation sourcegut
relationship to oxygenanaerobe
sample material processingDisecct cecum and colon in anaerobic chamber. Homogenize, dilute, plate on agar.
temperature37
Description

Keywords: GSC:MIxS;MIGS:6.0

BioProject
PRJNA474907 Bacteria
Retrieve all samples from this project

Submission
None, Erin Wong; 2019-02-05
Accession:
SAMN10878312
ID:
10878312

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