TARA_B100001123; TARA_20110809T1708Z_125_Combined-... - BioSample

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Identifiers: BioSample: SAMN07286218; Sample name: Alphaproteobacteria bacterium MarineAlpha6_Bin4

Organism: Alphaproteobacteria bacterium MarineAlpha6_Bin4
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria

Attributes

isolation source	saline water including plankton
collection date	2011-08-09
geographic location	Pacific Ocean: South Pacific Ocean
latitude and longitude	8.8999 S 142.5461 W
isolate	MarineAlpha6_Bin4
depth	140 m
sample type	metagenomic assembly
metagenome source	marine metagenome
temperature	23.706525
broad-scale environmental context	marine biome (ENVO:00000447)
collected by	Tara Oceans
note	This BioSample is a metagenomic assembly obtained from the marine metagenome BioSample: SAMEA2622837.
environmental_sample	TRUE
metagenomic	TRUE

Description: This sample (TARA_B100001123) was collected during the Tara Oceans expedition (2009-2013) at station TARA_125 (latitudeN=-8.8999, longitudeE=-142.5461) on date/time=2011-08-09T17:05:33, using a ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles. The sample material (saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)) was collected at a depth of 140-140 m, targeting a marine epipelagic mixed layer (ENVO:xxxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.22-3 micrometres), preserved on board with RNA-Later, and stored in liquid nitrogen for later detection of prokaryote nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis. This sample has replicate sample(s): TARA_B100001124.