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Organizing biological data
Gardnerella vaginalis
EMG produced TPA metagenomics assembly of PRJNA801448 data set (Metagenomic Analysis of the Urinary Microbiome of Postmenopausal Women).
EMG produced TPA metagenomics assembly of PRJNA700071 data set (Substantial overlap between symptomatic and asymptomatic genitourinary microbiota states).
EMG produced TPA metagenomics assembly of PRJNA679884 data set (Interstitial Cystitis Urinary Metagenomics).
EMG produced TPA metagenomics assembly of PRJNA680735 data set (Metagenome of the lower urinary tract).
EMG produced TPA metagenomics assembly of PRJNA385350 data set (Microbial metagenome of urinary tract infection).
EMG produced TPA metagenomics assembly of PRJNA678453 data set (Species-specific gene expression of the oral microbiota in health and diesease).
EMG produced TPA metagenomics assembly of PRJNA693652 data set (The intestinal bacteriomes and viromes of pationts with recurrent CDI).
EMG produced TPA metagenomics assembly of PRJEB52748 data set (Gut microbiome function and composition in infants from rural Kenya and association with human milk oligosaccharides).
EMG produced TPA metagenomics assembly of PRJEB52094 data set (In this study, we performed shotgun metagenomics sequencing on fecal DNA collected from 16 control subjects and 24 hemodialysis patients.).
Genomic Catalog of Human Bladder Bacteria
The soil bacterial community based on high-throughput sequencing technology.
EMG produced TPA metagenomics assembly of PRJDB10606 data set (Shotgun metagenome sequencing of saliva microbiome of MRONJ patients using HiSeq).
EMG produced TPA metagenomics assembly of PRJNA797778 data set (Vaginal Microbiome Research Consortium).
EMG produced TPA metagenomics assembly of PRJNA576566 data set (metagenomic studies of vaginal microbiome in HPV16 infection).
Simulation on stress response of Gardnerella vaginalis to lactobacilli via transcriptomic and proteomic analysis
EMG produced TPA metagenomics assembly of PRJNA631294 data set (Putative amylases in the human vagina).
EMG produced TPA metagenomics assembly of PRJEB37382 data set (Assessment of different methods for library preparation of human vaginal samples).
Clinical evaluation of mNGS in unbiased pathogens diagnosis of UTIs
EMG produced TPA metagenomics assembly of PRJEB51898 data set (Vaginal metagenome dataset of 47 healthy women).
EMG produced TPA metagenomics assembly of PRJNA779415 data set (Vaginal microbiome of reproductive age mother daughter pairs).
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