Salvelinus alpinus isolate:IW2-2015 (ID 433373) - BioProject

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Accession: PRJNA433373 ID: 433373

Salvelinus alpinus isolate:IW2-2015 (Arctic char)

Salvelinus alpinus isolate:IW2-2015 RefSeq Genome sequencing and assembly

See Genome Information for Salvelinus alpinus

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15 additional projects are related by organism.

The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA348349). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.

Accession	PRJNA433373
Data Type	RefSeq Genome sequencing and assembly, RefSeq Transcriptome or Gene expression
Scope	Monoisolate
Organism	Salvelinus alpinus[Taxonomy ID: 8036] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus; Salvelinus alpinus
Publications (total 4) Less...	Christensen KA et al., "The Arctic charr (Salvelinus alpinus) genome and transcriptome assembly.", PLoS One, 2018;13(9):e0204076 More... Christensen KA et al., "The Arctic charr (Salvelinus alpinus) genome and transcriptome assembly.", PLoS One, 2018;13(9):e0204076 Ahi EP et al., "Validation of reference genes for expression studies during craniofacial development in arctic charr.", PLoS One, 2013;8(6):e66389 Sibthorpe D et al., "Characterisation and expression of the paired box protein 7 (Pax7) gene in polymorphic Arctic charr (Salvelinus alpinus).", Comp Biochem Physiol B Biochem Mol Biol, 2006 Nov-Dec;145(3-4):371-83 Doiron S et al., "A comparative mitogenomic analysis of the potential adaptive value of Arctic charr mtDNA introgression in brook charr populations (Salvelinus fontinalis Mitchill).", Mol Biol Evol, 2002 Nov;19(11):1902-9 Less...
Submission	Registration date: 30-Jan-2018 University of Victoria
Relevance	Model Organism

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	83936
Transcript	67196
Protein Sequences	59926
Publications
PubMed	4
PMC	2
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	WGS	Chrs	BioSample	Taxonomy
GCF_002910315.2	Chromosome	PPUY00000000	40	SAMN06561764	Salvelinus sp. IW2-2015

Related GenBank Project

PRJNA348349 : Salvelinus sp. IW2-2015 isolate:IW2-2015 Genome sequencing and assembly

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Salvelinus alpinus isolate:IW2-2015 (Arctic char)

Salvelinus alpinus isolate:IW2-2015 RefSeq Genome sequencing and assembly

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