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Accession: PRJNA348349 ID: 348349

Salvelinus sp. IW2-2015 isolate:IW2-2015

Salvelinus sp. IW2-2015 isolate:IW2-2015 Genome sequencing and assembly

See Genome Information for Salvelinus alpinus
Arctic charr are important salmonid fish in Holarctic fresh-water ecosystems and fisheries. More...
AccessionPRJNA348349
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismSalvelinus sp. IW2-2015[Taxonomy ID: 2691554]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus; Salvelinus sp. IW2-2015
Publications
  • Christensen KA et al., "The Arctic charr (Salvelinus alpinus) genome and transcriptome assembly.", PLoS One, 2018;13(9):e0204076
  • Doiron S et al., "A comparative mitogenomic analysis of the potential adaptive value of Arctic charr mtDNA introgression in brook charr populations (Salvelinus fontinalis Mitchill).", Mol Biol Evol, 2002 Nov;19(11):1902-9
SubmissionRegistration date: 30-Jan-2018
University of Victoria
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)40
WGS master1
SRA Experiments63
Publications
PubMed2
PMC1
Other datasets
BioSample14
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases461
Data volume, Tbytes0.25
Related RefSeq Project
PRJNA433373 : Salvelinus alpinus isolate:IW2-2015 RefSeq Genome sequencing and assembly

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