ID 496689 - BioProject

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Accession: PRJEB26150 ID: 496689

EMG produced TPA metagenomics assembly of the Marine microbial communities from the Deep Atlantic Ocean - MP0440 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA330154. This project includes samples from the following biomes: Environmental, Aquatic, Marine.

Accession	PRJEB26150
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 16-Oct-2018 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	836
WGS master	14
Publications
PubMed	1
PMC	1
Other datasets
BioSample	14
Assembly	13

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

13
13

Assembly	WGS	BioSample	Taxonomy
GCA_950067465.1	CATMGN000000000	SAMEA112958012	Acinetobacter johnsonii
GCA_950071365.1	CATMNH000000000	SAMEA112958018	Alteromonas macleodii
GCA_950065025.1	CATMCT000000000	SAMEA112958021	Qipengyuania flava
GCA_950071275.1	CATMMX000000000	SAMEA112958010	uncultured Halomonas sp.
GCA_950071555.1	CATMNL000000000	SAMEA112958011	uncultured Nitrospina sp.
GCA_950061465.1	CATLWE000000000	SAMEA112958014	uncultured Pelagibacteraceae bacterium
GCA_950071225.1	CATMNB000000000	SAMEA112958022	uncultured Pelagibacteraceae bacterium
GCA_950067415.1	CATMGV000000000	SAMEA112958020	uncultured Pseudoalteromonas sp.
GCA_950071185.1	CATMNI000000000	SAMEA112958017	uncultured Pseudomonadaceae bacterium
GCA_950067355.1	CATMGF000000000	SAMEA112958015	uncultured Psychrobacter sp.
GCA_950063685.1	CATMAL000000000	SAMEA112958016	uncultured Sphingobium sp.
GCA_950071295.1	CATMNA000000000	SAMEA112958019	uncultured Sulfitobacter sp.
GCA_950073185.1	CATMPU000000000	SAMEA112958013	uncultured archaeon

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EMG produced TPA metagenomics assembly of the Marine microbial communities from the Deep Atlantic Ocean - MP0440 metagenome (marine metagenome) data set.

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