ID 908055 - BioProject

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Accession: PRJEB58022 ID: 908055

EMG produced TPA metagenomics assembly of PRJNA812410 data set (Quantifying the impact of gut microbiota on inflammation and hypertensive organ damage).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA812410, and was assembled with metaSPAdes v3. More...

Accession	PRJEB58022
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 3-Dec-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2528
WGS master	194
Publications
PubMed	1
PMC	1
Other datasets
BioSample	194
Assembly	194

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

194
194

Assembly	WGS	BioSample	Taxonomy
GCA_947652235.1	CANTCJ000000000	SAMEA112250352	Acutalibacter muris
GCA_947651045.1	CANSXW000000000	SAMEA112250354	Bacteroides acidifaciens
GCA_947652965.1	CANTFC000000000	SAMEA112250394	Bifidobacterium pseudolongum
GCA_947650605.1	CANSWA000000000	SAMEA112250226	Blautia coccoides
GCA_947650715.1	CANSWG000000000	SAMEA112250216	Clostridioides difficile
GCA_947651755.1	CANTAN000000000	SAMEA112250209	Dubosiella newyorkensis
GCA_947651065.1	CANSXR000000000	SAMEA112250219	Enterococcus gallinarum
GCA_947651265.1	CANSYU000000000	SAMEA112250323	Enterococcus hirae
GCA_948444935.1	CAOJVL000000000	SAMEA112250287	Eubacterium plexicaudatum
GCA_947652515.1	CANTDE000000000	SAMEA112250241	Lactobacillus johnsonii
GCA_948435095.1	CAOJGF000000000	SAMEA112250309	Muribaculum intestinale
GCA_948470555.1	CAOKPC000000000	SAMEA112250291	Parabacteroides distasonis
GCA_948465355.1	CAOJWN000000000	SAMEA112250293	Parabacteroides goldsteinii
GCA_947650975.1	CANSXN000000000	SAMEA112250322	Thomasclavelia cocleata
GCA_948466135.1	CAOJZJ000000000	SAMEA112250289	Turicimonas muris
GCA_947652555.1	CANTDN000000000	SAMEA112250243	[Clostridium] innocuum
GCA_947650615.1	CANSWB000000000	SAMEA112250224	[Clostridium] symbiosum
GCA_947651615.1	CANSZY000000000	SAMEA112250257	uncultured Akkermansia sp.
GCA_947650805.1	CANSWS000000000	SAMEA112250300	uncultured Alistipes sp.
GCA_947650595.1	CANSVQ000000000	SAMEA112250232	uncultured Alistipes sp.
GCA_947650635.1	CANSVZ000000000	SAMEA112250228	uncultured Alistipes sp.
GCA_947652545.1	CANTDM000000000	SAMEA112250213	uncultured Alistipes sp.
GCA_948465635.1	CAOJXQ000000000	SAMEA112250340	uncultured Alistipes sp.
GCA_948471545.1	CAOKTA000000000	SAMEA112250296	uncultured Alphaproteobacteria bacterium
GCA_948471425.1	CAOKSK000000000	SAMEA112250281	uncultured Anaerotruncus sp.
GCA_947650835.1	CANSWZ000000000	SAMEA112250365	uncultured Angelakisella sp.
GCA_947651195.1	CANSYB000000000	SAMEA112250206	uncultured Bacteroidales bacterium
GCA_947650755.1	CANSWN000000000	SAMEA112250252	uncultured Bacteroidales bacterium
GCA_947650905.1	CANSWT000000000	SAMEA112250256	uncultured Bacteroidales bacterium
GCA_947652495.1	CANTDL000000000	SAMEA112250251	uncultured Bacteroides sp.
GCA_948434895.1	CAOJFT000000000	SAMEA112250278	uncultured Bacteroides sp.
GCA_947651255.1	CANSYN000000000	SAMEA112250325	uncultured Butyricicoccus sp.
GCA_947650945.1	CANSXA000000000	SAMEA112250254	uncultured Candidatus Saccharibacteria bacterium
GCA_947651505.1	CANSZM000000000	SAMEA112250259	uncultured Candidatus Saccharibacteria bacterium
GCA_948435375.1	CAOJGQ000000000	SAMEA112250266	uncultured Candidatus Saccharibacteria bacterium
GCA_948469925.1	CAOKNC000000000	SAMEA112250283	uncultured Clostridia bacterium
GCA_948466205.1	CAOJZQ000000000	SAMEA112250360	uncultured Clostridia bacterium
GCA_948439055.1	CAOJMN000000000	SAMEA112250346	uncultured Clostridia bacterium
GCA_948435105.1	CAOJGG000000000	SAMEA112250313	uncultured Clostridia bacterium
GCA_948468435.1	CAOKIE000000000	SAMEA112250361	uncultured Clostridia bacterium
GCA_947650685.1	CANSWL000000000	SAMEA112250215	uncultured Clostridia bacterium
GCA_947650885.1	CANSXG000000000	SAMEA112250367	uncultured Clostridia bacterium
GCA_947651495.1	CANSZN000000000	SAMEA112250376	uncultured Clostridia bacterium
GCA_947650435.1	CANSVE000000000	SAMEA112250225	uncultured Clostridia bacterium
GCA_947652335.1	CANTCT000000000	SAMEA112250301	uncultured Clostridia bacterium
GCA_947651025.1	CANSXQ000000000	SAMEA112250324	uncultured Clostridia bacterium
GCA_947650445.1	CANSVI000000000	SAMEA112250221	uncultured Clostridia bacterium
GCA_947652415.1	CANTCY000000000	SAMEA112250374	uncultured Clostridia bacterium
GCA_947650495.1	CANSVM000000000	SAMEA112250223	uncultured Clostridia bacterium
GCA_947651605.1	CANSZX000000000	SAMEA112250373	uncultured Clostridia bacterium
GCA_947652745.1	CANTEF000000000	SAMEA112250238	uncultured Clostridia bacterium
GCA_947650525.1	CANSVR000000000	SAMEA112250220	uncultured Clostridia bacterium
GCA_947650705.1	CANSWF000000000	SAMEA112250218	uncultured Clostridia bacterium
GCA_947651085.1	CANSXT000000000	SAMEA112250320	uncultured Clostridia bacterium
GCA_948471355.1	CAOKSH000000000	SAMEA112250345	uncultured Clostridium sp.
GCA_948438695.1	CAOJLT000000000	SAMEA112250271	uncultured Clostridium sp.
GCA_947651475.1	CANSZK000000000	SAMEA112250357	uncultured Clostridium sp.
GCA_947650405.1	CANSVG000000000	SAMEA112250336	uncultured Clostridium sp.
GCA_947651175.1	CANSYF000000000	SAMEA112250248	uncultured Clostridium sp.
GCA_947652935.1	CANTEZ000000000	SAMEA112250236	uncultured Clostridium sp.
GCA_947651535.1	CANSZS000000000	SAMEA112250368	uncultured Clostridium sp.
GCA_947651155.1	CANSYJ000000000	SAMEA112250214	uncultured Clostridium sp.
GCA_948444955.1	CAOJVM000000000	SAMEA112250315	uncultured Coriobacteriaceae bacterium
GCA_948441335.1	CAOJPX000000000	SAMEA112250277	uncultured Culturomica sp.
GCA_947652465.1	CANTDF000000000	SAMEA112250353	uncultured Dorea sp.
GCA_947652675.1	CANTDY000000000	SAMEA112250383	uncultured Dorea sp.
GCA_947650955.1	CANSXL000000000	SAMEA112250303	uncultured Dorea sp.
GCA_947652615.1	CANTDX000000000	SAMEA112250382	uncultured Dorea sp.
GCA_948468935.1	CAOKKC000000000	SAMEA112250294	uncultured Dorea sp.
GCA_948435395.1	CAOJGR000000000	SAMEA112250263	uncultured Eggerthellaceae bacterium
GCA_947650915.1	CANSWY000000000	SAMEA112250305	uncultured Eggerthellaceae bacterium
GCA_947652695.1	CANTEB000000000	SAMEA112250337	uncultured Enterorhabdus sp.
GCA_948468035.1	CAOKGR000000000	SAMEA112250286	uncultured Enterorhabdus sp.
GCA_948468955.1	CAOKKT000000000	SAMEA112250359	uncultured Eubacterium sp.
GCA_947652355.1	CANTCR000000000	SAMEA112250299	uncultured Eubacterium sp.
GCA_947651285.1	CANSYR000000000	SAMEA112250370	uncultured Eubacterium sp.
GCA_947651105.1	CANSYG000000000	SAMEA112250378	uncultured Eubacterium sp.
GCA_947652295.1	CANTCU000000000	SAMEA112250246	uncultured Eubacterium sp.
GCA_947650425.1	CANSVN000000000	SAMEA112250328	uncultured Firmicutes bacterium
GCA_947650485.1	CANSVL000000000	SAMEA112250239	uncultured Flavonifractor sp.
GCA_947650695.1	CANSWJ000000000	SAMEA112250390	uncultured Hungatella sp.
GCA_947651725.1	CANTAJ000000000	SAMEA112250377	uncultured Hungatella sp.
GCA_947650935.1	CANSXI000000000	SAMEA112250258	uncultured Lachnoclostridium sp.
GCA_947650895.1	CANSXC000000000	SAMEA112250369	uncultured Lachnoclostridium sp.
GCA_947651575.1	CANSZT000000000	SAMEA112250393	uncultured Lachnoclostridium sp.
GCA_948445005.1	CAOJVS000000000	SAMEA112250273	uncultured Lachnoclostridium sp.
GCA_948468965.1	CAOKKD000000000	SAMEA112250279	uncultured Lachnoclostridium sp.
GCA_947652725.1	CANTEE000000000	SAMEA112250330	uncultured Lachnospiraceae bacterium
GCA_947651565.1	CANSZU000000000	SAMEA112250261	uncultured Lachnospiraceae bacterium
GCA_947650535.1	CANSVW000000000	SAMEA112250227	uncultured Lachnospiraceae bacterium
GCA_947651625.1	CANSZZ000000000	SAMEA112250379	uncultured Lachnospiraceae bacterium
GCA_947652925.1	CANTEW000000000	SAMEA112250235	uncultured Lachnospiraceae bacterium
GCA_947650505.1	CANSVO000000000	SAMEA112250332	uncultured Lachnospiraceae bacterium
GCA_947650395.1	CANSVH000000000	SAMEA112250237	uncultured Lachnospiraceae bacterium
GCA_947651635.1	CANTAA000000000	SAMEA112250384	uncultured Lachnospiraceae bacterium
GCA_947650555.1	CANSVV000000000	SAMEA112250362	uncultured Lachnospiraceae bacterium
GCA_947652705.1	CANTEC000000000	SAMEA112250326	uncultured Lachnospiraceae bacterium
GCA_947650475.1	CANSVK000000000	SAMEA112250338	uncultured Lachnospiraceae bacterium
GCA_947651275.1	CANSYP000000000	SAMEA112250327	uncultured Lachnospiraceae bacterium
GCA_947650295.1	CANSUW000000000	SAMEA112250386	uncultured Lachnospiraceae bacterium
GCA_947651325.1	CANSYT000000000	SAMEA112250308	uncultured Lachnospiraceae bacterium
GCA_947651035.1	CANSXV000000000	SAMEA112250356	uncultured Lachnospiraceae bacterium
GCA_947652255.1	CANTCL000000000	SAMEA112250319	uncultured Lachnospiraceae bacterium
GCA_947651355.1	CANSZB000000000	SAMEA112250335	uncultured Lachnospiraceae bacterium
GCA_947652635.1	CANTDU000000000	SAMEA112250389	uncultured Lachnospiraceae bacterium
GCA_947651525.1	CANSZO000000000	SAMEA112250380	uncultured Lachnospiraceae bacterium
GCA_947651675.1	CANTAG000000000	SAMEA112250381	uncultured Lachnospiraceae bacterium
GCA_947651055.1	CANSXU000000000	SAMEA112250358	uncultured Lachnospiraceae bacterium
GCA_947650355.1	CANSUZ000000000	SAMEA112250392	uncultured Lachnospiraceae bacterium
GCA_947652345.1	CANTCV000000000	SAMEA112250349	uncultured Lachnospiraceae bacterium
GCA_947651645.1	CANTAB000000000	SAMEA112250375	uncultured Lachnospiraceae bacterium
GCA_947651715.1	CANTAK000000000	SAMEA112250387	uncultured Lachnospiraceae bacterium
GCA_947651845.1	CANTAX000000000	SAMEA112250207	uncultured Lachnospiraceae bacterium
GCA_947651655.1	CANTAC000000000	SAMEA112250366	uncultured Lachnospiraceae bacterium
GCA_947650415.1	CANSVC000000000	SAMEA112250231	uncultured Lachnospiraceae bacterium
GCA_947651005.1	CANSXP000000000	SAMEA112250348	uncultured Lachnospiraceae bacterium
GCA_947650585.1	CANSVT000000000	SAMEA112250230	uncultured Lachnospiraceae bacterium
GCA_947650515.1	CANSVP000000000	SAMEA112250334	uncultured Lachnospiraceae bacterium
GCA_948435085.1	CAOJGH000000000	SAMEA112250270	uncultured Lachnospiraceae bacterium
GCA_948444965.1	CAOJVO000000000	SAMEA112250276	uncultured Lachnospiraceae bacterium
GCA_948439895.1	CAOJNN000000000	SAMEA112250275	uncultured Lachnospiraceae bacterium
GCA_948438645.1	CAOJLQ000000000	SAMEA112250265	uncultured Lachnospiraceae bacterium
GCA_948435345.1	CAOJGP000000000	SAMEA112250262	uncultured Lachnospiraceae bacterium
GCA_948442525.1	CAOJSD000000000	SAMEA112250268	uncultured Lachnospiraceae bacterium
GCA_948439585.1	CAOJNF000000000	SAMEA112250272	uncultured Lachnospiraceae bacterium
GCA_948468925.1	CAOKKA000000000	SAMEA112250395	uncultured Lachnospiraceae bacterium
GCA_948471075.1	CAOKQY000000000	SAMEA112250290	uncultured Lachnospiraceae bacterium
GCA_948471345.1	CAOKSJ000000000	SAMEA112250347	uncultured Lachnospiraceae bacterium
GCA_948470355.1	CAOKOJ000000000	SAMEA112250343	uncultured Lachnospiraceae bacterium
GCA_948469955.1	CAOKNE000000000	SAMEA112250282	uncultured Lachnospiraceae bacterium
GCA_948469595.1	CAOKMK000000000	SAMEA112250274	uncultured Lachnospiraceae bacterium
GCA_947651765.1	CANTAO000000000	SAMEA112250388	uncultured Lactobacillus sp.
GCA_947652785.1	CANTEK000000000	SAMEA112250240	uncultured Lactobacillus sp.
GCA_948468415.1	CAOKIC000000000	SAMEA112250399	uncultured Mollicutes bacterium
GCA_947651365.1	CANSYZ000000000	SAMEA112250297	uncultured Muribaculaceae bacterium
GCA_947650965.1	CANSXJ000000000	SAMEA112250350	uncultured Muribaculaceae bacterium
GCA_947652105.1	CANTBZ000000000	SAMEA112250260	uncultured Muribaculaceae bacterium
GCA_947651775.1	CANTAP000000000	SAMEA112250211	uncultured Muribaculaceae bacterium
GCA_947650375.1	CANSVB000000000	SAMEA112250233	uncultured Muribaculaceae bacterium
GCA_947652315.1	CANTCO000000000	SAMEA112250208	uncultured Muribaculaceae bacterium
GCA_947651695.1	CANTAF000000000	SAMEA112250385	uncultured Muribaculaceae bacterium
GCA_948468645.1	CAOKIK000000000	SAMEA112250295	uncultured Muribaculaceae bacterium
GCA_948468445.1	CAOKID000000000	SAMEA112250311	uncultured Muribaculaceae bacterium
GCA_948466145.1	CAOJZI000000000	SAMEA112250317	uncultured Muribaculaceae bacterium
GCA_948439045.1	CAOJMM000000000	SAMEA112250310	uncultured Muribaculaceae bacterium
GCA_948470845.1	CAOKQE000000000	SAMEA112250314	uncultured Muribaculaceae bacterium
GCA_948435045.1	CAOJGD000000000	SAMEA112250288	uncultured Muribaculaceae bacterium
GCA_948435075.1	CAOJGE000000000	SAMEA112250312	uncultured Muribaculaceae bacterium
GCA_947652525.1	CANTDJ000000000	SAMEA112250247	uncultured Odoribacter sp.
GCA_947650255.1	CANSUV000000000	SAMEA112250339	uncultured Oscillibacter sp.
GCA_948445135.1	CAOJWF000000000	SAMEA112250280	uncultured Peptococcaceae bacterium
GCA_947651015.1	CANSXO000000000	SAMEA112250307	uncultured Porphyromonadaceae bacterium
GCA_947652445.1	CANTDD000000000	SAMEA112250245	uncultured Porphyromonadaceae bacterium
GCA_947651315.1	CANSYQ000000000	SAMEA112250306	uncultured Porphyromonadaceae bacterium
GCA_947651415.1	CANSZH000000000	SAMEA112250333	uncultured Porphyromonadaceae bacterium
GCA_947651075.1	CANSXS000000000	SAMEA112250363	uncultured Porphyromonadaceae bacterium
GCA_947651545.1	CANSZQ000000000	SAMEA112250391	uncultured Porphyromonadaceae bacterium
GCA_947651555.1	CANSZR000000000	SAMEA112250255	uncultured Porphyromonadaceae bacterium
GCA_947651405.1	CANSZE000000000	SAMEA112250302	uncultured Porphyromonadaceae bacterium
GCA_947651515.1	CANSZP000000000	SAMEA112250372	uncultured Porphyromonadaceae bacterium
GCA_947650985.1	CANSXK000000000	SAMEA112250217	uncultured Porphyromonadaceae bacterium
GCA_947652505.1	CANTDI000000000	SAMEA112250249	uncultured Porphyromonadaceae bacterium
GCA_947651135.1	CANSXY000000000	SAMEA112250210	uncultured Porphyromonadaceae bacterium
GCA_948470615.1	CAOKPJ000000000	SAMEA112250316	uncultured Porphyromonadaceae bacterium
GCA_948470815.1	CAOKQA000000000	SAMEA112250264	uncultured Porphyromonadaceae bacterium
GCA_948466985.1	CAOKBW000000000	SAMEA112250285	uncultured Porphyromonadaceae bacterium
GCA_948438725.1	CAOJLV000000000	SAMEA112250267	uncultured Porphyromonadaceae bacterium
GCA_948436395.1	CAOJHY000000000	SAMEA112250292	uncultured Porphyromonadaceae bacterium
GCA_948466285.1	CAOJZW000000000	SAMEA112250284	uncultured Porphyromonadaceae bacterium
GCA_947651295.1	CANSYO000000000	SAMEA112250304	uncultured Prevotella sp.
GCA_947650655.1	CANSWD000000000	SAMEA112250234	uncultured Pseudoflavonifractor sp.
GCA_947652765.1	CANTEI000000000	SAMEA112250242	uncultured Pseudomonadota bacterium
GCA_947650565.1	CANSVU000000000	SAMEA112250222	uncultured Rikenellaceae bacterium
GCA_947651595.1	CANSZW000000000	SAMEA112250244	uncultured Robinsoniella sp.
GCA_947651345.1	CANSYY000000000	SAMEA112250355	uncultured Roseburia sp.
GCA_948435235.1	CAOJGL000000000	SAMEA112250396	uncultured Roseburia sp.
GCA_948470805.1	CAOKQB000000000	SAMEA112250398	uncultured Roseburia sp.
GCA_947650855.1	CANSWX000000000	SAMEA112250298	uncultured Ruminococcus sp.
GCA_947651485.1	CANSZL000000000	SAMEA112250229	uncultured bacterium
GCA_947651235.1	CANSYE000000000	SAMEA112250250	uncultured bacterium
GCA_947652585.1	CANTDQ000000000	SAMEA112250329	uncultured bacterium
GCA_947652625.1	CANTDS000000000	SAMEA112250253	uncultured bacterium
GCA_947651185.1	CANSYH000000000	SAMEA112250318	uncultured bacterium
GCA_947651125.1	CANSXZ000000000	SAMEA112250364	uncultured bacterium
GCA_947651305.1	CANSYS000000000	SAMEA112250321	uncultured bacterium
GCA_947650865.1	CANSXD000000000	SAMEA112250351	uncultured bacterium
GCA_947651665.1	CANTAD000000000	SAMEA112250371	uncultured bacterium
GCA_947652305.1	CANTCP000000000	SAMEA112250212	uncultured bacterium
GCA_947651375.1	CANSZA000000000	SAMEA112250331	uncultured bacterium
GCA_948469975.1	CAOKNF000000000	SAMEA112250397	uncultured bacterium
GCA_948468635.1	CAOKJB000000000	SAMEA112250269	uncultured bacterium
GCA_948438825.1	CAOJMH000000000	SAMEA112250342	uncultured bacterium
GCA_948444945.1	CAOJVN000000000	SAMEA112250341	uncultured bacterium
GCA_948438995.1	CAOJMO000000000	SAMEA112250344	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJNA812410 data set (Quantifying the impact of gut microbiota on inflammation and hypertensive organ damage).

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