Metagenomic sequencing of Rotating Biological Cont... (ID 579813) - BioProject

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Accession: PRJEB30654 ID: 579813

Metagenomic sequencing of Rotating Biological Contactor biofilm

Metagenomic sequencing of Rotating Biological Contactor biofilm samples

The samples include 14 biofilm samples from rotating biological contactors that form the tertiary treatment system of the wastewater treatment plant in Guelph, Ontario, Canada. More...

Accession	PRJEB30654
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Publications	Spasov E et al., "High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant.", ISME J, 2020 Jul;14(7):1857-1872
Submission	Registration date: 27-Oct-2019 UNIVERSITY OF WATERLOO

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	101
WGS master	92
Genomic DNA	9
SRA Experiments	14
Protein Sequences	9
Publications
PubMed	1
PMC	1
Other datasets
BioSample	106
Assembly	92

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Total

92
92

Assembly	WGS	BioSample	Taxonomy
GCA_902826685.1	CADEFT000000000	SAMEA6595194	uncultured Acidobacteriota bacterium
GCA_902826795.1	CADEGD000000000	SAMEA6595185	uncultured Acidobacteriota bacterium
GCA_902826505.1	CADEFG000000000	SAMEA6595193	uncultured Acidobacteriota bacterium
GCA_902826515.1	CADEFD000000000	SAMEA6595188	uncultured Acidobacteriota bacterium
GCA_902826605.1	CADEFM000000000	SAMEA6595196	uncultured Acidobacteriota bacterium
GCA_902825875.1	CADECP000000000	SAMEA6595187	uncultured Acidobacteriota bacterium
GCA_902825985.1	CADEDC000000000	SAMEA6595189	uncultured Acidobacteriota bacterium
GCA_902826065.1	CADEDM000000000	SAMEA6595186	uncultured Acidobacteriota bacterium
GCA_902825945.1	CADECY000000000	SAMEA6595195	uncultured Acidobacteriota bacterium
GCA_902826135.1	CADEDR000000000	SAMEA6595190	uncultured Acidobacteriota bacterium
GCA_902826385.1	CADEEU000000000	SAMEA6595184	uncultured Acidobacteriota bacterium
GCA_902826455.1	CADEEV000000000	SAMEA6595191	uncultured Acidobacteriota bacterium
GCA_902826465.1	CADEEX000000000	SAMEA6595183	uncultured Acidobacteriota bacterium
GCA_902826415.1	CADEES000000000	SAMEA6595192	uncultured Acidobacteriota bacterium
GCA_902826025.1	CADEDH000000000	SAMEA6595182	uncultured Actinomycetes bacterium
GCA_902826035.1	CADEDG000000000	SAMEA6595171	uncultured Alphaproteobacteria bacterium
GCA_902825865.1	CADECX000000000	SAMEA6595179	uncultured Alphaproteobacteria bacterium
GCA_902826335.1	CADEEL000000000	SAMEA6595174	uncultured Alphaproteobacteria bacterium
GCA_902826095.1	CADEDN000000000	SAMEA6595180	uncultured Alphaproteobacteria bacterium
GCA_902826245.1	CADEEA000000000	SAMEA6595173	uncultured Alphaproteobacteria bacterium
GCA_902826265.1	CADEEE000000000	SAMEA6595181	uncultured Alphaproteobacteria bacterium
GCA_902826695.1	CADEFU000000000	SAMEA6595177	uncultured Alphaproteobacteria bacterium
GCA_902826825.1	CADEGI000000000	SAMEA6595178	uncultured Alphaproteobacteria bacterium
GCA_902826885.1	CADEGL000000000	SAMEA6595172	uncultured Alphaproteobacteria bacterium
GCA_902827075.1	CADEHH000000000	SAMEA6595175	uncultured Alphaproteobacteria bacterium
GCA_902826935.1	CADEGR000000000	SAMEA6595170	uncultured Alphaproteobacteria bacterium
GCA_902827005.1	CADEGY000000000	SAMEA6595176	uncultured Alphaproteobacteria bacterium
GCA_902826215.1	CADEDY000000000	SAMEA6595161	uncultured Bacteroidetes bacterium
GCA_902826165.1	CADEDV000000000	SAMEA6595163	uncultured Bacteroidetes bacterium
GCA_902825795.1	CADECG000000000	SAMEA6595162	uncultured Bacteroidetes bacterium
GCA_902826195.1	CADEDX000000000	SAMEA6595156	uncultured Bradyrhizobium sp.
GCA_902826305.1	CADEEH000000000	SAMEA6595155	uncultured Burkholderiales bacterium
GCA_902826345.1	CADEEN000000000	SAMEA6595154	uncultured Burkholderiales bacterium
GCA_902825995.1	CADEDE000000000	SAMEA6595153	uncultured Burkholderiales bacterium
GCA_902826075.1	CADEDL000000000	SAMEA6595150	uncultured Candidatus Nitrosocosmicus sp.
GCA_902826145.1	CADEDT000000000	SAMEA6595149	uncultured Caulobacteraceae bacterium
GCA_902827055.1	CADEHD000000000	SAMEA6595148	uncultured Chloroflexota bacterium
GCA_902826485.1	CADEEZ000000000	SAMEA6595147	uncultured Gammaproteobacteria bacterium
GCA_902826425.1	CADEET000000000	SAMEA6595146	uncultured Gemmatimonadota bacterium
GCA_902825965.1	CADEDA000000000	SAMEA6595144	uncultured Gemmatimonadota bacterium
GCA_902826755.1	CADEGB000000000	SAMEA6595145	uncultured Gemmatimonadota bacterium
GCA_902826615.1	CADEFN000000000	SAMEA6595143	uncultured Gemmatimonadota bacterium
GCA_902826715.1	CADEFX000000000	SAMEA6595124	uncultured Hyphomicrobiales bacterium
GCA_902826675.1	CADEFV000000000	SAMEA6595127	uncultured Hyphomicrobiales bacterium
GCA_902826905.1	CADEGQ000000000	SAMEA6595126	uncultured Hyphomicrobiales bacterium
GCA_902826365.1	CADEEO000000000	SAMEA6595128	uncultured Hyphomicrobiales bacterium
GCA_902826255.1	CADEEC000000000	SAMEA6595125	uncultured Hyphomicrobiales bacterium
GCA_902825785.1	CADECN000000000	SAMEA6595141	uncultured Hyphomicrobium sp.
GCA_902826555.1	CADEFI000000000	SAMEA6595142	uncultured Hyphomicrobium sp.
GCA_902825775.1	CADECF000000000	SAMEA6595116	uncultured Lysobacteraceae bacterium
GCA_902826655.1	CADEFR000000000	SAMEA6595140	uncultured Methylibium sp.
GCA_902826815.1	CADEGF000000000	SAMEA6595139	uncultured Mycobacteriaceae bacterium
GCA_902826865.1	CADEGN000000000	SAMEA6595138	uncultured Myxococcales bacterium
GCA_902826915.1	CADEGP000000000	SAMEA6595135	uncultured Nitrosomonas sp.
GCA_902826055.1	CADEDJ000000000	SAMEA6595137	uncultured Nitrosomonas sp.
GCA_902826115.1	CADEDO000000000	SAMEA6595136	uncultured Nitrosomonas sp.
GCA_902501035.1	CABVST000000000	SAMEA5954146	uncultured Nitrospira sp.
GCA_902500995.1	CABVSR000000000	SAMEA5954139	uncultured Nitrospira sp.
GCA_902500795.1	CABVSB000000000	SAMEA5954142	uncultured Nitrospira sp.
GCA_902500825.1	CABVRX000000000	SAMEA5954144	uncultured Nitrospira sp.
GCA_902500785.1	CABVRW000000000	SAMEA5954141	uncultured Nitrospira sp.
GCA_902500805.1	CABVSA000000000	SAMEA5954145	uncultured Nitrospira sp.
GCA_902500775.1	CABVRZ000000000	SAMEA5954147	uncultured Nitrospira sp.
GCA_902500755.1	CABVRV000000000	SAMEA5954150	uncultured Nitrospira sp.
GCA_902500745.1	CABVRS000000000	SAMEA5954148	uncultured Nitrospira sp.
GCA_902500715.1	CABVRO000000000	SAMEA5954140	uncultured Nitrospira sp.
GCA_902500705.1	CABVRR000000000	SAMEA5954143	uncultured Nitrospira sp.
GCA_902500695.1	CABVRQ000000000	SAMEA5954152	uncultured Nitrospira sp.
GCA_902826855.1	CADEGK000000000	SAMEA6595134	uncultured Phenylobacterium sp.
GCA_902826775.1	CADEHE000000000	SAMEA6595132	uncultured Pseudomonadota bacterium
GCA_902826635.1	CADEFQ000000000	SAMEA6595129	uncultured Pseudomonadota bacterium
GCA_902826575.1	CADEFJ000000000	SAMEA6595133	uncultured Pseudomonadota bacterium
GCA_902827015.1	CADEGZ000000000	SAMEA6595130	uncultured Pseudomonadota bacterium
GCA_902826225.1	CADEED000000000	SAMEA6595131	uncultured Pseudomonadota bacterium
GCA_902826565.1	CADEFF000000000	SAMEA6595123	uncultured Rhodospirillaceae bacterium
GCA_902825855.1	CADECW000000000	SAMEA6595122	uncultured Rhodospirillales bacterium
GCA_902826745.1	CADEGA000000000	SAMEA6595121	uncultured Sphingobium sp.
GCA_902825815.1	CADECQ000000000	SAMEA6595119	uncultured Sphingomonadales bacterium
GCA_902826325.1	CADEEK000000000	SAMEA6595120	uncultured Sphingomonadales bacterium
GCA_902826315.1	CADEEJ000000000	SAMEA6595118	uncultured Steroidobacter sp.
GCA_902826295.1	CADEEI000000000	SAMEA6595117	uncultured Steroidobacter sp.
GCA_902826395.1	CADEER000000000	SAMEA6595167	uncultured bacterium
GCA_902826495.1	CADEFA000000000	SAMEA6595169	uncultured bacterium
GCA_902825955.1	CADECZ000000000	SAMEA6595164	uncultured bacterium
GCA_902826705.1	CADEFY000000000	SAMEA6595151	uncultured bacterium
GCA_902826835.1	CADEGH000000000	SAMEA6595166	uncultured bacterium
GCA_902826595.1	CADEFK000000000	SAMEA6595152	uncultured bacterium
GCA_902826945.1	CADEGS000000000	SAMEA6595165	uncultured bacterium
GCA_902825905.1	CADECO000000000	SAMEA6595157	uncultured beta proteobacterium
GCA_902825845.1	CADECM000000000	SAMEA6595159	uncultured beta proteobacterium
GCA_902825825.1	CADECJ000000000	SAMEA6595158	uncultured beta proteobacterium
GCA_902826155.1	CADEDU000000000	SAMEA6595160	uncultured beta proteobacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	127
Data volume, Mbytes	83388

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Metagenomic sequencing of Rotating Biological Contactor biofilm

Metagenomic sequencing of Rotating Biological Contactor biofilm samples

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