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Accession: PRJNA186875 ID: 186875

Food and Drug Administration, Center for Food Safety and Applied Nutrition: FoodBorne Pathogen Research

Whole genome sequencing of cultured food-borne pathogens collected for research purposes.
AccessionPRJNA186875
TypeUmbrella project (Subtype:Disease)
SubmissionRegistration date: 18-Jan-2013
Center for Food Safety and Applied Nutrition
RelevanceAgricultural, Medical, Industrial, Environmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)109684
WGS master42263
Genomic DNA242
SRA Experiments44858
Protein Sequences2427494
Publications
PubMed24
PMC22
Other datasets
BioSample44924
GEO DataSets1
Assembly42394
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes129
SRA Data Details
ParameterValue
Data volume, Gbases21,000
Data volume, Tbytes13.00
Food and Drug Administration, Center for Food Safety and Applied Nutrition: FoodBorne Pathogen Research encompasses the following 526 sub-projects:
Project TypeNumber of Projects
Genome sequencing

22
5
408
84
7
526
BioProject
accession
Assembly
level
NameTitle
PRJNA342323 Complete genomeChryseobacterium sp.Genomic analysis of Chryseobacter sp. (FDA)
PRJNA161259 ContigsCitrobacter freundii 47NFoodborne Pathgen Survey (FDA)
PRJNA286240 Complete genomeClostridium botulinumGenomeTrakr: CFSAN, Moffett Center (US Food and Drug Administration)
PRJNA192665 ContigsClostridium botulinum A1 str. CFSAN002368Foodborne Pathogen Survey (FDA)
PRJNA192664 ContigsClostridium botulinum CFSAN002367Foodborne Pathogen Survey (FDA)
List all 526 'Genome sequencing' projects...

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