ID 855822 - BioProject

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Accession: PRJEB54020 ID: 855822

EMG produced TPA metagenomics assembly of PRJNA254927 data set (Freshwater habitats river Metagenome).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA254927, and was assembled with metaSPAdes v3. More...

Accession	PRJEB54020
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 5-Jul-2022 EMG
Locus Tag Prefix	AABI15

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	242
WGS master	82
Publications
PubMed	1
PMC	1
Other datasets
BioSample	82
Assembly	82

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

82
82

Assembly	WGS	BioSample	Taxonomy
GCA_963923705.1	CAWULN000000000	SAMEA115107630	Acinetobacter junii
GCA_963923735.1	CAWUMT000000000	SAMEA115107628	uncultured Acidimicrobiales bacterium
GCA_963923175.1	CAWUNO000000000	SAMEA115107666	uncultured Actinomycetales bacterium
GCA_963923105.1	CAWUMC000000000	SAMEA115107665	uncultured Actinomycetales bacterium
GCA_963923875.1	CAWUOG000000000	SAMEA115107623	uncultured Alphaproteobacteria bacterium
GCA_963923565.1	CAWUMH000000000	SAMEA115107689	uncultured Alphaproteobacteria bacterium
GCA_963923895.1	CAWUMB000000000	SAMEA115107670	uncultured Alphaproteobacteria bacterium
GCA_963923655.1	CAWUMM000000000	SAMEA115107681	uncultured Burkholderiales bacterium
GCA_963923725.1	CAWULV000000000	SAMEA115107618	uncultured Chitinophagaceae bacterium
GCA_963923145.1	CAWUMR000000000	SAMEA115107660	uncultured Cyanobium sp.
GCA_963923305.1	CAWUNA000000000	SAMEA115107613	uncultured Flavobacteriales bacterium
GCA_963923265.1	CAWUNI000000000	SAMEA115107674	uncultured Gammaproteobacteria bacterium
GCA_963923355.1	CAWUOE000000000	SAMEA115107683	uncultured Gemmataceae bacterium
GCA_963923615.1	CAWULW000000000	SAMEA115107635	uncultured Holophagaceae bacterium
GCA_963923885.1	CAWULL000000000	SAMEA115107675	uncultured Hyphomicrobiaceae bacterium
GCA_963923415.1	CAWUMW000000000	SAMEA115107656	uncultured Hyphomicrobiales bacterium
GCA_963923195.1	CAWUNF000000000	SAMEA115107641	uncultured Hyphomicrobiales bacterium
GCA_963923165.1	CAWUNL000000000	SAMEA115107687	uncultured Hyphomicrobiales bacterium
GCA_963923525.1	CAWULY000000000	SAMEA115107664	uncultured Ilumatobacteraceae bacterium
GCA_963923515.1	CAWUNK000000000	SAMEA115107644	uncultured Limnohabitans sp.
GCA_963923185.1	CAWUNN000000000	SAMEA115107680	uncultured Limnohabitans sp.
GCA_963923135.1	CAWUNV000000000	SAMEA115107626	uncultured Methylococcaceae bacterium
GCA_963923255.1	CAWULZ000000000	SAMEA115107668	uncultured Methylococcaceae bacterium
GCA_963923865.1	CAWUNM000000000	SAMEA115107651	uncultured Methylococcaceae bacterium
GCA_963923905.1	CAWUNX000000000	SAMEA115107639	uncultured Methylocucumis sp.
GCA_963923505.1	CAWUNY000000000	SAMEA115107648	uncultured Methylocystaceae bacterium
GCA_963923375.1	CAWUMF000000000	SAMEA115107625	uncultured Methylocystaceae bacterium
GCA_963923575.1	CAWUNC000000000	SAMEA115107661	uncultured Methylocystis sp.
GCA_963923645.1	CAWULO000000000	SAMEA115107646	uncultured Methylophilaceae bacterium
GCA_963923635.1	CAWULM000000000	SAMEA115107624	uncultured Micrococcales bacterium
GCA_963923805.1	CAWUNP000000000	SAMEA115107652	uncultured Novosphingobium sp.
GCA_963923295.1	CAWUMU000000000	SAMEA115107685	uncultured Opitutia bacterium
GCA_963923535.1	CAWULQ000000000	SAMEA115107686	uncultured Oxalobacteraceae bacterium
GCA_963923855.1	CAWUNQ000000000	SAMEA115107608	uncultured Planctomycetaceae bacterium
GCA_963923675.1	CAWUOK000000000	SAMEA115107619	uncultured Planctomycetaceae bacterium
GCA_963923125.1	CAWUOJ000000000	SAMEA115107621	uncultured Planctomycetaceae bacterium
GCA_963923225.1	CAWUOA000000000	SAMEA115107637	uncultured Planctomycetaceae bacterium
GCA_963923545.1	CAWULU000000000	SAMEA115107629	uncultured Rhizobium sp.
GCA_963923245.1	CAWULK000000000	SAMEA115107659	uncultured Rhodoluna sp.
GCA_963923485.1	CAWUMQ000000000	SAMEA115107633	uncultured Rickettsiales bacterium
GCA_963923495.1	CAWUOB000000000	SAMEA115107676	uncultured Roseomonas sp.
GCA_963923115.1	CAWUOD000000000	SAMEA115107657	uncultured Singulisphaera sp.
GCA_963923585.1	CAWULJ000000000	SAMEA115107672	uncultured Streptomycetaceae bacterium
GCA_963923395.1	CAWUNG000000000	SAMEA115107636	uncultured Thermoleophilia bacterium
GCA_963923285.1	CAWUMX000000000	SAMEA115107688	uncultured Thermoleophilia bacterium
GCA_963923745.1	CAWUNB000000000	SAMEA115107647	uncultured Thiotrichales bacterium
GCA_963923685.1	CAWUOI000000000	SAMEA115107682	uncultured Verrucomicrobiales bacterium
GCA_963923475.1	CAWULS000000000	SAMEA115107649	uncultured archaeon
GCA_963923755.1	CAWUML000000000	SAMEA115107632	uncultured bacterium
GCA_963923465.1	CAWULP000000000	SAMEA115107638	uncultured bacterium
GCA_963923555.1	CAWUNS000000000	SAMEA115107677	uncultured bacterium
GCA_963923435.1	CAWUNH000000000	SAMEA115107627	uncultured bacterium
GCA_963923445.1	CAWUNZ000000000	SAMEA115107610	uncultured bacterium
GCA_963923425.1	CAWUMV000000000	SAMEA115107634	uncultured bacterium
GCA_963923695.1	CAWUOC000000000	SAMEA115107669	uncultured bacterium
GCA_963923715.1	CAWUOH000000000	SAMEA115107631	uncultured bacterium
GCA_963923595.1	CAWUMN000000000	SAMEA115107612	uncultured bacterium
GCA_963923665.1	CAWUNU000000000	SAMEA115107684	uncultured bacterium
GCA_963923795.1	CAWUME000000000	SAMEA115107643	uncultured bacterium
GCA_963923835.1	CAWUMA000000000	SAMEA115107667	uncultured bacterium
GCA_963923825.1	CAWUNR000000000	SAMEA115107678	uncultured bacterium
GCA_963923845.1	CAWULR000000000	SAMEA115107655	uncultured bacterium
GCA_963923785.1	CAWUMG000000000	SAMEA115107611	uncultured bacterium
GCA_963923815.1	CAWUND000000000	SAMEA115107614	uncultured bacterium
GCA_963923765.1	CAWUOF000000000	SAMEA115107658	uncultured bacterium
GCA_963923775.1	CAWULX000000000	SAMEA115107645	uncultured bacterium
GCA_963923625.1	CAWUMZ000000000	SAMEA115107642	uncultured bacterium
GCA_963923605.1	CAWUNE000000000	SAMEA115107654	uncultured bacterium
GCA_963923155.1	CAWULI000000000	SAMEA115107663	uncultured bacterium
GCA_963923385.1	CAWUMP000000000	SAMEA115107622	uncultured bacterium
GCA_963923365.1	CAWUMD000000000	SAMEA115107617	uncultured bacterium
GCA_963923345.1	CAWUMI000000000	SAMEA115107671	uncultured bacterium
GCA_963923405.1	CAWUNT000000000	SAMEA115107662	uncultured bacterium
GCA_963923205.1	CAWUNJ000000000	SAMEA115107616	uncultured bacterium
GCA_963923315.1	CAWUMJ000000000	SAMEA115107640	uncultured bacterium
GCA_963923095.1	CAWUMO000000000	SAMEA115107650	uncultured bacterium
GCA_963923335.1	CAWUMS000000000	SAMEA115107620	uncultured bacterium
GCA_963923455.1	CAWULT000000000	SAMEA115107615	uncultured bacterium
GCA_963923215.1	CAWULH000000000	SAMEA115107679	uncultured bacterium
GCA_963923325.1	CAWUMK000000000	SAMEA115107673	uncultured bacterium
GCA_963923275.1	CAWUNW000000000	SAMEA115107653	uncultured bacterium
GCA_963923235.1	CAWUMY000000000	SAMEA115107609	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJNA254927 data set (Freshwater habitats river Metagenome).

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