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Accession: PRJNA1067659 ID: 1067659

Inia geoffrensis (Amazon river dolphin) genome, mIniGeo1

See Genome Information for Inia geoffrensis
The Amazon River dolphin, or Boto (Inia geoffrensis), sometimes called the pink dolphin, is a fresh water dolphin found throughout the Amazon River and it's principle tributaries, in Bolivia, Brazil, Colombia, Ecuador, Peru and Venezuela. Inia is the only genus in the family Iniidae, and there are currently two recognized subspecies (I. g. boliviensis, I. g. geoffrensis). I. geoffrensis is currently classified as Endangered by the IUCN (January 2023), due to highly fragmented and declining populations. This sample was obtained from the last remaining captive Amazon River Dolphin in Europe, at the Duisburg Zoo in Duisburg Germany, and named "Orinoco" for the region of its origin. Orinoco was also referred to as "Baby" at the Duisburg Zoo, because he was captured with his mother and three other individuals in 1975, and transferred to the Duisburg Zoo, where he lived until his death in December, 2020. More...
AccessionPRJNA1067659
TypeUmbrella project
OrganismInia geoffrensis[Taxonomy ID: 9725]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Iniidae; Inia; Inia geoffrensis
SubmissionRegistration date: 22-Jan-2024
Cetaceans Genome Project
RelevanceReference genome
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)47
WGS master2
SRA Experiments7
Other datasets
BioSample1
Assembly2
SRA Data Details
ParameterValue
Data volume, Gbases254
Data volume, Tbytes0.12
This project encompasses the following 3 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Chromosomes
SRA or Trace
Total

2
1
3
BioProject
accession
Assembly
level
NameTitle
PRJNA925497 ChromosomesInia geoffrensisInia geoffrensis (Amazon river dolphin) genome, mIniGeo1, haplotype 1 (Cetaceans Genome Project)
PRJNA925498 ChromosomesInia geoffrensisInia geoffrensis (Amazon river dolphin) genome, mIniGeo1, haplotype 2 (Cetaceans Genome Project)
PRJNA1149706 SRA or TraceInia geoffrensis (Amazon river dolphin) genome, mIniGeo1, sequence dataInia geoffrensis (Amazon river dolphin) genome, mIniGeo1, sequence data (Vertebrate Genomes Project)

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