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Diphasiastrum complanatum v3.1

Organism name:
Diphasiastrum complanatum (club-mosses)
Infraspecific name:
Cultivar: PW_Plant_1
BioSample:
SAMN32337709
BioProject:
PRJNA914350
Submitter:
DOE Joint Genome Institute
Date:
2023/03/21
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_029204225.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAQGDR01
Assembly method:
MECAT v. 1.2
Genome coverage:
139.35x
Sequencing technology:
PacBio CCS

IDs: 16225601 [UID] 41607328 [GenBank]

See Genome Information for Diphasiastrum complanatum

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length1,744,989,973
Total ungapped length1,712,339,973
Gaps between scaffolds3,265
Number of scaffolds8,441
Scaffold N50728,786
Scaffold L50572
Number of contigs8,441
Contig N50728,786
Contig L50572
Total number of chromosomes and plasmids24
Number of component sequences (WGS or clone)8,441

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_029204235.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM055092.1n/an/a0
Chromosome 2CM055093.1n/an/a0
Chromosome 3CM055094.1n/an/a0
Chromosome 4CM055095.1n/an/a0
Chromosome 5CM055096.1n/an/a0
Chromosome 6CM055097.1n/an/a0
Chromosome 7CM055098.1n/an/a0
Chromosome 8CM055099.1n/an/a0
Chromosome 9CM055100.1n/an/a0
Chromosome 10CM055101.1n/an/a0
Chromosome 11CM055102.1n/an/a0
Chromosome 12CM055103.1n/an/a0
Chromosome 13CM055104.1n/an/a0
Chromosome 14CM055105.1n/an/a0
Chromosome 15CM055106.1n/an/a0
Chromosome 16CM055107.1n/an/a0
Chromosome 17CM055108.1n/an/a0
Chromosome 18CM055109.1n/an/a0
Chromosome 19CM055110.1n/an/a0
Chromosome 20CM055111.1n/an/a0
Chromosome 21CM055112.1n/an/a0
Chromosome 22CM055113.1n/an/a0
Chromosome 23CM055114.1n/an/a0
Chromosome 24CM055115.1n/an/a0
unplacedn/an/an/a5,152

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
All1,744,989,9738,4411,712,339,973728,78603,265
Chromosome 1101,640,31223999,260,312866,1160238
Chromosome 283,909,78714082,519,7871,568,9540139
Chromosome 382,785,38717181,085,3871,151,9880170
Chromosome 478,740,28418276,930,284875,8070181
Chromosome 577,889,77417176,189,774995,7030170
Chromosome 675,594,06416673,944,0641,069,9570165
Chromosome 775,135,21614473,705,2161,222,6140143
Chromosome 870,730,95919868,760,959794,7200197
Chromosome 967,477,06015065,987,060877,6810149
Chromosome 1064,462,01415062,972,0141,240,2610149
Chromosome 1163,309,65215161,809,652947,4730150
Chromosome 1259,474,04212658,224,0421,011,8070125
Chromosome 1357,628,42312856,358,4231,005,6690127
Chromosome 1452,343,24210651,293,2421,039,5290105
Chromosome 1551,472,12911550,332,1291,013,2710114
Chromosome 1651,441,10211850,271,1021,278,5030117
Chromosome 1749,617,9089848,647,9081,235,852097
Chromosome 1849,270,5869448,340,5861,086,557093
Chromosome 1949,168,02313047,878,023695,3510129
Chromosome 2048,528,79210047,538,792929,698099
Chromosome 2146,397,47312345,177,473856,2520122
Chromosome 2244,767,4459543,827,4451,055,287094
Chromosome 2342,495,9009541,555,9001,054,276094
Chromosome 2410,872,527999,892,527108,365098
unplaced289,837,8725,152289,837,87258,61300