LPUW00000000.1 Bubalus bubalis

Master

# of Contigs: 447,289 # of Proteins: 0 # of Scaffolds/Chrs: 4,836 Total length: 2,677,178,324 bp BioProject: PRJNA267486 BioSample: SAMN03196556 Keywords: WGS Organism: Bubalus bubalis – show lineagehide lineage Eukaryota, Metazoa, Chordata, Craniata, Vertebrata, Euteleostomi, Mammalia, Eutheria, Laurasiatheria, Cetartiodactyla, Ruminantia, Pecora, Bovidae, Bovinae, Bubalus Biosource: /breed = Egyptian buffalo /isolate = EGYBUF_1.0 /mol_type = genomic /sex = female /tissue_type = blood WGS: LPUW01000001:LPUW01447289 Scaffolds: KZ673290:KZ678125 4,836 scaffolds, total length is 2,941,477,123 bases Reference: Assembly of the Egyptian Buffalo Genome : Unpublished – Egyptian Buffalo Genome Consoritum Submission: Submitted (26-AUG-2017) CIS, Nile University, Juhayna Square, Sheikh-Zayed, Giza, Egypt – Egyptian Buffalo Genome Consoritum

The Bubalus bubalis whole genome shotgun (WGS) project has the project accession LPUW00000000. This version of the project (01) has the accession number LPUW01000000, and consists of sequences LPUW01000001-LPUW01447289. ##Genome-Assembly-Data-START## Assembly Date : 2015 Assembly Method : Velvet v. 1.1; Mapping to Reference Cattle Genome (GCF_000003055.6) using Bowtie2 v. 2.1.0; Mapping to Reference Cattle Genome (GCF_000003055.6) using SHRiMP v. 2.2.3 Expected Final Version : yes Reference-guided Assembly : GCF_000003055.6 Genome Coverage : 70.0x Sequencing Technology : SOLiD ##Genome-Assembly-Data-END##

Contigs

Download

GenBank:LPUW01.1.gbff.gz 214.9 Mb
 LPUW01.2.gbff.gz 208.9 Mb
 LPUW01.3.gbff.gz 198.8 Mb
 LPUW01.4.gbff.gz 198.9 Mb
 LPUW01.5.gbff.gz 198.4 Mb
 LPUW01.6.gbff.gz 87 Mb

FASTA:LPUW01.1.fsa_nt.gz 147.3 Mb
 LPUW01.2.fsa_nt.gz 145.9 Mb
 LPUW01.3.fsa_nt.gz 145.9 Mb
 LPUW01.4.fsa_nt.gz 145.9 Mb
 LPUW01.5.fsa_nt.gz 145.8 Mb
 LPUW01.6.fsa_nt.gz 60.8 Mb

ASN.1:LPUW01.1.bbs.gz 115.8 Mb
 LPUW01.2.bbs.gz 115.8 Mb
 LPUW01.3.bbs.gz 115.8 Mb
 LPUW01.4.bbs.gz 115.9 Mb
 LPUW01.5.bbs.gz 116.1 Mb
 LPUW01.6.bbs.gz 48.9 Mb

History

Minor Version	Create Date
1	03/09/2018
5	10/29/2022