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8YTX:
Tubulin-RB3-TTL in complex with compound SI9
PDB ID:
8YTX
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MMDB ID:
247990
PDB Deposition Date:
2024/3/26
Updated in MMDB:
2024/06
Experimental Method:
x-ray diffraction
Resolution:
2.53 Å
Source Organism:
Rattus norvegicus
▼
Taxonomy
Molecule
Rattus norvegicus
E
Sus scrofa
A, B, C, D
Gallus gallus
F
Similar Structures:
VAST+
Download sequence data
Biological Unit for 8YTX: hexameric; determined by author
Molecular Components in 8YTX
Label
Count
Molecule
Proteins (6 molecules)
A
C
2
Detyrosinated Tubulin Alpha-1b Chain
B
D
2
Tubulin--tyrosine Ligase
E
1
Stathmin-4
F
1
Tubulin--tyrosine Ligase
Chemicals and Non-standard biopolymers (14 molecules)
1
2
GUANOSINE-5'-TRIPHOSPHATE
2
2
CALCIUM ION
3
3
MAGNESIUM ION
4
2
GUANOSINE-5'-DIPHOSPHATE
5
2
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
6
2
MAGNESIUM ION
7
1
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303