8K8S: F8-A22-E4 complex of MPXV in complex with DNA and Ara-CTP

PDB ID: 8K8SDownload
MMDB ID: 247839
PDB Deposition Date: 2023/7/31
Updated in MMDB: 2024/06
Experimental Method:
electron microscopy
Resolution: 3.06  Å
Source Organism:
DNA molecule▼
Similar Structures:
Biological Unit for 8K8S: pentameric; determined by author and by software
Molecular Components in 8K8S
Label Count Molecule
Proteins (3 molecules)
1
DNA Polymerase F8
Molecule annotation
1
Uracil-dna Glycosylase E4
Molecule annotation
1
DNA Polymerase Processivity Factor Component A20
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*ap*tp*cp*cp*tp*cp*cp*cp*cp*tp*ap*c)-3')
Molecule annotation
1
DNA (5'-d(p*tp*ap*gp*gp*tp*ap*gp*gp*gp*gp*ap*gp*gp*ap*t)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
MAGNESIUM IONMAGNESIUM ION
2
1
4-amino-1-{5-O-[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-arabinofuranosyl}pyrimidin-2(1H)-one4-amino-1-{5-O-[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-arabinofuranosyl}pyrimidin-2(1H)-one
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303