8JM6: Endo-deglycosylated hydroxynitrile lyase isozyme 5 mutant L331A/S333V/P340L from Prunus communis complexed with 2,2-dimethyl-4H-benzo[d][1,3]dioxine-6-carbaldehyde (catalytic conformation)

PDB ID: 8JM6Download
MMDB ID: 247813
PDB Deposition Date: 2023/6/4
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 1.91  Å
Source Organism:
Similar Structures:
Biological Unit for 8JM6: monomeric; determined by author and by software (PISA)
Molecular Components in 8JM6
Label Count Molecule
Protein (1 molecule)
1
(R)-mandelonitrile Lyase
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
1
2,2-dimethyl-4H-1,3-benzodioxine-6-carbaldehyde2,2-dimethyl-4H-1,3-benzodioxine-6-carbaldehyde
2
1
FLAVIN-ADENINE DINUCLEOTIDEFLAVIN-ADENINE DINUCLEOTIDE
3
6
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
4
1
PHOSPHATE IONPHOSPHATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303