NCBI
National Center for
Biotechnology Information
Search
8JM0:
Endo-deglycosylated hydroxynitrile lyase isozyme 5 mutant L331A from Prunus communis complexed with 2,2-dimethyl-4H-benzo[d][1,3]dioxine-6-carbaldehyde (Form A)
PDB ID:
8JM0
Download
MMDB ID:
248106
PDB Deposition Date:
2023/6/4
Updated in MMDB:
2024/06
Experimental Method:
x-ray diffraction
Resolution:
1.79 Å
Source Organism:
Prunus dulcis
Similar Structures:
VAST+
Download sequence data
Biological Unit for 8JM0: monomeric; determined by author and by software (PISA)
Molecular Components in 8JM0
Label
Count
Molecule
Protein (1 molecule)
A
1
(R)-mandelonitrile Lyase
Chemicals and Non-standard biopolymers (14 molecules)
1
9
2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
2,2-dimethyl-4H-1,3-benzodioxine-6-carbaldehyde
3
1
FLAVIN-ADENINE DINUCLEOTIDE
4
1
TRIETHYLENE GLYCOL
5
1
DI(HYDROXYETHYL)ETHER
6
1
BICINE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303