7VY2: STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOBACTER SPHAEROIDES DIMER

PDB ID: 7VY2Download
MMDB ID: 214859
PDB Deposition Date: 2021/11/13
Updated in MMDB: 2024/11
Experimental Method:
electron microscopy
Resolution: 2.75  Å
Source Organism:
Similar Structures:
Biological Unit for 7VY2: 66-meric; determined by author
Molecular Components in 7VY2
Label Count Molecule
Proteins (66 molecules)
2
Photosynthetic Reaction Center L Subunit
Molecule annotation
2
Reaction Center Protein M Chain
Molecule annotation
2
Photosynthetic Reaction Center Subunit H
Molecule annotation
28
Antenna Pigment Protein Alpha Chain
Molecule annotation
28
Antenna Pigment Protein Beta Chain
Molecule annotation
2
Pufx
Molecule annotation
2
Protein-u
Molecule annotation
Chemicals and Non-standard biopolymers (201 molecules)
1
64
BACTERIOCHLOROPHYLL ABACTERIOCHLOROPHYLL A
2
4
BACTERIOPHEOPHYTIN ABACTERIOPHEOPHYTIN A
3
8
UBIQUINONE-10UBIQUINONE-10
4
27
DODECYL-BETA-D-MALTOSIDEDODECYL-BETA-D-MALTOSIDE
5
26
(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
6
2
FE (III) IONFE (III) ION
7
54
SPHEROIDENESPHEROIDENE
8
11
CARDIOLIPINCARDIOLIPIN
9
4
PHOSPHATIDYLETHANOLAMINEPHOSPHATIDYLETHANOLAMINE
10
1
LAURYL DIMETHYLAMINE-N-OXIDELAURYL DIMETHYLAMINE-N-OXIDE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303