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6Z2K:
The structure of the tetrameric HDAC1/MIDEAS/DNTTIP1 MiDAC deacetylase complex
PDB ID:
6Z2K
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MMDB ID:
189929
PDB Deposition Date:
2020/5/16
Updated in MMDB:
2020/10
Experimental Method:
electron microscopy
Resolution:
4.5 Å
Source Organism:
Homo sapiens
Similar Structures:
VAST+
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Biological Unit for 6Z2K: dodecameric; determined by author
Molecular Components in 6Z2K
Label
Count
Molecule
Proteins (12 molecules)
C
E
K
I
4
Histone Deacetylase 1
(Gene symbol:
HDAC1
)
A
B
G
H
4
Deoxynucleotidyltransferase Terminal-interacting Protein 1
(Gene symbol:
DNTTIP1
)
F
D
L
J
4
Mitotic Deacetylase-associated Sant Domain Protein
(Gene symbol:
MIDEAS
)
Chemicals and Non-standard biopolymers (16 molecules)
1
4
ZINC ION
2
8
POTASSIUM ION
3
4
INOSITOL HEXAKISPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303