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6OHP:
Structure of compound 1 (halopemide) bound human Phospholipase D2 catalytic domain
PDB ID:
6OHP
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MMDB ID:
184305
PDB Deposition Date:
2019/4/6
Updated in MMDB:
2023/11
Experimental Method:
x-ray diffraction
Resolution:
2.6 Å
Source Organism:
Homo sapiens
Similar Structures:
VAST+
Download sequence data
Biological Unit for 6OHP: monomeric; determined by author and by software (PISA)
Molecular Components in 6OHP
Label
Count
Molecule
Protein (1 molecule)
A
1
Phospholipase D2
(Gene symbol:
PLD2
)
Chemicals and Non-standard biopolymers (5 molecules)
1
1
N-{2-[4-(5-chloro-2-oxo-2,3-dihydro-1H-benzimidazol-1-yl)piperidin-1-yl]ethyl}-4-fluorobenzamide
2
1
SULFATE ION
3
3
GLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303