6NYA: Crystal Structure of ubiquitin E1 (Uba1) in complex with Ubc3 (Cdc34) and ubiquitin

PDB ID: 6NYADownload
MMDB ID: 178253
PDB Deposition Date: 2019/2/11
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.065  Å
Source Organism:
Saccharomyces cerevisiae S288C▼
Similar Structures:
Biological Unit for 6NYA: trimeric; determined by author and by software (PISA)
Molecular Components in 6NYA
Label Count Molecule
Proteins (3 molecules)
1
Ubiquitin-activating Enzyme E1 1
Molecule annotation
1
Ubiquitin
Molecule annotation
1
Ubiquitin-conjugating Enzyme E2-34 KDA
Molecule annotation
Chemicals and Non-standard biopolymers (22 molecules)
1
1
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
2
1
MAGNESIUM IONMAGNESIUM ION
3
8
SULFATE IONSULFATE ION
4
12
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303