6JO0: Crystal structure of the DTS-motif rhodopsin from Phaeocystis globosa virus 12T

PDB ID: 6JO0Download
MMDB ID: 180008
PDB Deposition Date: 2019/3/19
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 1.651  Å
Source Organism:
Similar Structures:
Biological Unit for 6JO0: monomeric; determined by author and by software (PISA)
Molecular Components in 6JO0
Label Count Molecule
Protein (1 molecule)
1
Virrdts
Molecule annotation
Chemicals and Non-standard biopolymers (19 molecules)
1
1
RETINALRETINAL
2
6
N-OCTANEN-OCTANE
3
1
PHOSPHATE IONPHOSPHATE ION
4
5
HEXANEHEXANE
5
1
DECANEDECANE
6
1
DODECANEDODECANE
7
3
nonanenonane
8
1
(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303