6I9L: JmjC domain-containing protein 5 (JMJD5) in complex with Mn and pyridine-2,4-dicarboxylic acid (2,4-PDCA)

PDB ID: 6I9LDownload
MMDB ID: 181884
PDB Deposition Date: 2018/11/23
Updated in MMDB: 2022/12
Experimental Method:
x-ray diffraction
Resolution: 1.53  Å
Source Organism:
Similar Structures:
Biological Unit for 6I9L: monomeric; determined by author and by software (PISA)
Molecular Components in 6I9L
Label Count Molecule
Protein (1 molecule)
1
Jmjc Domain-containing Protein 5
(Gene symbol: KDM8)
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
MANGANESE (II) IONMANGANESE (II) ION
2
1
PYRIDINE-2,4-DICARBOXYLIC ACIDPYRIDINE-2,4-DICARBOXYLIC ACID
3
1
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303