6E6I: Crystal structure of 4-methyl HOPDA bound to LigY from Sphingobium sp. strain SYK-6

PDB ID: 6E6IDownload
MMDB ID: 171675
PDB Deposition Date: 2018/7/24
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.4  Å
Source Organism:
Similar Structures:
Biological Unit for 6E6I: hexameric; determined by author and by software (PISA)
Molecular Components in 6E6I
Label Count Molecule
Proteins (6 molecules)
6
2,2',3-trihydroxy-3'-methoxy-5,5'-dicarboxybiphenyl Meta-cleavage Compound Hydrolase
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
6
ZINC IONZINC ION
2
6
(1Z,3E)-5-carboxy-3-methyl-5-oxo-1-phenylpenta-1,3-dien-1-olate(1Z,3E)-5-carboxy-3-methyl-5-oxo-1-phenylpenta-1,3-dien-1-olate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303