5U38: Crystal structure of native lectin from Platypodium elegans seeds (PELa) complexed with Man1-3Man-OMe

PDB ID: 5U38Download
MMDB ID: 154969
PDB Deposition Date: 2016/12/1
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.6  Å
Source Organism:
Similar Structures:
Biological Unit for 5U38: dimeric; determined by author and by software (PISA)
Molecular Components in 5U38
Label Count Molecule
Proteins (2 molecules)
2
Lectin
Molecule annotation
Chemicals and Non-standard biopolymers (11 molecules)
1
3
methyl alpha-D-mannopyranosidemethyl alpha-D-mannopyranoside
2
2
alpha-D-mannopyranosealpha-D-mannopyranose
3
2
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
4
2
MANGANESE (II) IONMANGANESE (II) ION
5
2
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303