National Center for
Biotechnology Information

5LUF: Cryo-EM of bovine respirasome

PDB ID:	5LUF Download
MMDB ID:	145285
PDB Deposition Date:	2016/9/8
Updated in MMDB:	2019/12
Experimental Method:	electron microscopy
Resolution:	9.1 Å
Source Organism:	Bos taurus
Similar Structures:

Biological Unit for 5LUF: 62-meric; determined by author

Molecular Components in 5LUF
Label	Count	Molecule
Proteins (62 molecules)
c l	2	Cytochrome B-c1 Complex Subunit 1, Mitochondrial (Gene symbol: UQCRC1)
m n	2	Cytochrome B-c1 Complex Subunit 2, Mitochondrial (Gene symbol: UQCRC2)
b o	2	Cytochrome B (Gene symbol: CYTB)
d p	2	Cytochrome C1, Heme Protein, Mitochondrial (Gene symbol: CYC1)
e q	2	Cytochrome B-c1 Complex Subunit Rieske, Mitochondrial (Gene symbol: UQCRFS1)
f r	2	Cytochrome B-c1 Complex Subunit 7 (Gene symbol: UQCRB)
g s	2	Cytochrome B-c1 Complex Subunit 8 (Gene symbol: UQCRQ)
h t	2	Cytochrome B-c1 Complex Subunit 6, Mitochondrial (Gene symbol: UQCRH)
i u	2	Cytochrome B-c1 Complex Subunit Rieske, Mitochondrial (Gene symbol: UQCRFS1)
j v	2	Cytochrome B-c1 Complex Subunit 9 (Gene symbol: UQCR10)
k w	2	Cytochrome B-c1 Complex Subunit 10 (Gene symbol: UQCR11)
x	1	Cytochrome C Oxidase Subunit 1
y	1	Cytochrome C Oxidase Subunit 2 (Gene symbol: COX2)
z	1	Cytochrome C Oxidase Subunit 3
1	1	Cytochrome C Oxidase Subunit 4 Isoform 1, Mitochondrial (Gene symbol: COX4I1)
2	1	Cytochrome C Oxidase Subunit 5A, Mitochondrial (Gene symbol: COX5A)
3	1	Cytochrome C Oxidase Subunit 5B, Mitochondrial (Gene symbol: COX5B)
4	1	Cytochrome C Oxidase Subunit 6a2, Mitochondrial (Gene symbol: COX6A2)
5	1	Cytochrome C Oxidase Subunit 6B1 (Gene symbol: COX6B1)
6	1	Cytochrome C Oxidase Subunit 6C (Gene symbol: MGC148714)
7	1	Cytochrome C Oxidase Subunit 7a1, Mitochondrial (Gene symbol: COX7A1)
8	1	Cytochrome C Oxidase Subunit 7B, Mitochondrial (Gene symbol: COX7B)
9	1	Cytochrome C Oxidase Subunit 7C, Mitochondrial (Gene symbol: COX7C)
0	1	Cytochrome C Oxidase Subunit 8B, Mitochondrial (Gene symbol: COX8B)
A	1	Complex I
B	1	Complex I
C	1	Complex I
D	1	Complex I
E	1	Complex I
F	1	Complex I
G	1	Complex I
H	1	Complex I
I	1	Complex I
J	1	Complex I
K	1	Complex I
L	1	Complex I
M	1	Complex I
N	1	Complex I
O	1	Complex I
P	1	Complex I
Q	1	Complex I
R	1	Complex I
S	1	Complex I
T	1	Complex I
V	1	Complex I
W	1	Complex I
X	1	Complex I
Y	1	Complex I
a	1	Complex I
U	1	Complex I
Z	1	Complex I
Chemicals and Non-standard biopolymers (22 molecules)
1	4	PROTOPORPHYRIN IX CONTAINING FE (Link to PubChem not yet available)
2	2	HEME C (Link to PubChem not yet available)
3	3	FE2/S2 (INORGANIC) CLUSTER (Link to PubChem not yet available)
4	3	COPPER (II) ION (Link to PubChem not yet available)
5	1	MAGNESIUM ION (Link to PubChem not yet available)
6	2	HEME-A (Link to PubChem not yet available)
7	1	ZINC ION (Link to PubChem not yet available)
8	6	IRON/SULFUR CLUSTER (Link to PubChem not yet available)

* Click molecule labels to explore molecular sequence information.

Citing MMDB

Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303