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5KD8:
BT_4244 metallopeptidase in complex with Tn antigen
PDB ID:
5KD8
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MMDB ID:
146234
PDB Deposition Date:
2016/6/7
Updated in MMDB:
2023/10
Experimental Method:
x-ray diffraction
Resolution:
2.3 Å
Source Organism:
Bacteroides thetaiotaomicron VPI-5482
Similar Structures:
VAST+
Download sequence data
Biological Unit for 5KD8: monomeric; determined by author and by software (PISA)
Molecular Components in 5KD8
Label
Count
Molecule
Protein (1 molecule)
A
1
Metallopeptidase
(Gene symbol:
BT_4244
)
Chemicals and Non-standard biopolymers (7 molecules)
1
1
ZINC ION
2
2
NICKEL (II) ION
3
2
SODIUM ION
4
1
SERINE
5
1
2-acetamido-2-deoxy-alpha-D-galactopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303