4II2: Crystal structure of Ubiquitin activating enzyme 1 (Uba1) in complex with the Ub E2 Ubc4, ubiquitin, and ATP/Mg

PDB ID: 4II2Download
MMDB ID: 107645
PDB Deposition Date: 2012/12/19
Updated in MMDB: 2017/11
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
Similar Structures:
Biological Unit for 4II2: trimeric; determined by author and by software (PISA)
Molecular Components in 4II2
Label Count Molecule
Proteins (3 molecules)
1
Ubiquitin-activating Enzyme E1 1
(Gene symbol: ptr3)
Molecule annotation
1
Ubiquitin-60s Ribosomal Protein L40
(Gene symbol: ubi1)
Molecule annotation
1
Ubiquitin-conjugating Enzyme E2 4
(Gene symbol: ubc4)
Molecule annotation
Chemicals and Non-standard biopolymers (15 molecules)
1
2
MAGNESIUM IONMAGNESIUM ION
2
1
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
3
1
2-(2-METHOXYETHOXY)ETHANOL2-(2-METHOXYETHOXY)ETHANOL
4
7
1,2-ETHANEDIOL1,2-ETHANEDIOL
5
4
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303