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4AV1:
Crystal structure of the human PARP-1 DNA binding domain in complex with DNA
PDB ID:
4AV1
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MMDB ID:
100502
PDB Deposition Date:
2012/5/23
Updated in MMDB:
2012/07
Experimental Method:
x-ray diffraction
Resolution:
3.1 Å
Source Organism:
synthetic construct
▼
Taxonomy
Molecule
synthetic construct
X, Y
Homo sapiens
A, B, C, D
Similar Structures:
VAST+
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Biological Unit for 4AV1: hexameric; determined by software (PISA)
Molecular Components in 4AV1
Label
Count
Molecule
Proteins (4 molecules)
A
B
C
D
4
Poly [adp-ribose] Polymerase 1
Nucleotides(2 molecules)
X
1
5'-d(*ap*ap*gp*tp*gp*tp*tp*gp*cp*ap*tp*tp)-3'
Y
1
5'-d(*tp*ap*ap*tp*gp*cp*ap*ap*cp*ap*cp*tp)-3'
Chemicals and Non-standard biopolymers (4 molecules)
1
4
ZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303