1YF8: Crystal structure of Himalayan mistletoe RIP reveals the presence of a natural inhibitor and a new functionally active sugar-binding site

PDB ID: 1YF8Download
MMDB ID: 32504
PDB Deposition Date: 2004/12/31
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.8  Å
Source Organism:
Similar Structures:
Biological Unit for 1YF8: dimeric; determined by author and by software (PISA)
Molecular Components in 1YF8
Label Count Molecule
Proteins (2 molecules)
1
Beta-galactoside-specific Lectin 4
Molecule annotation
1
Beta-galactoside-specific Lectin 4
Molecule annotation
Chemicals and Non-standard biopolymers (16 molecules)
1
7
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
alpha-D-mannopyranosealpha-D-mannopyranose
3
1
beta-D-mannopyranosebeta-D-mannopyranose
4
2
beta-D-glucopyranosebeta-D-glucopyranose
5
3
beta-D-galactopyranosebeta-D-galactopyranose
6
1
2-AMINO-4-ISOPROPYL-PTERIDINE-6-CARBOXYLIC ACID2-AMINO-4-ISOPROPYL-PTERIDINE-6-CARBOXYLIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303