1GZM: Structure of Bovine Rhodopsin in a Trigonal Crystal Form

PDB ID: 1GZMDownload
MMDB ID: 91105
PDB Deposition Date: 2002/5/24
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.65  Å
Source Organism:
Similar Structures:
Biological Unit for 1GZM: dimeric; determined by software (PISA)
Molecular Components in 1GZM
Label Count Molecule
Proteins (2 molecules)
2
Rhodopsin
(Gene symbol: RHO)
Molecule annotation
Chemicals and Non-standard biopolymers (37 molecules)
1
8
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
4
beta-D-mannopyranosebeta-D-mannopyranose
3
2
RETINALRETINAL
4
4
PALMITIC ACIDPALMITIC ACID
5
2
DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINEDI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
6
3
LAURYL DIMETHYLAMINE-N-OXIDELAURYL DIMETHYLAMINE-N-OXIDE
7
12
(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
8
2
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303