RAId
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Robust Accurate Identification - a suite of proteomics tools (including GUI and databases)
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CoinedPValues
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a C++ program for combining independent, weighted P-values
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MIDAs
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Molecule's Isotopic Distribution Analysis
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MiCId
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Microorganism Classification and Identification – using mass spectrometry data (MS/MS spectra) (including GUI)
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ITM Probe
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Information flow in interaction networks
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SaddleSum
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Robust and accurate data enrichment statistics via distribution
function of sum of weights
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ppiTrim
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constructing non-redundant and up-to-date interactomes
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