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Sample GSM52643

Query DataSets for GSM52643

Status

Public on Jun 03, 2005

Title

NuGEN Tumor Sample 2

Sample type

RNA

Source name

Total RNA from Breast Adenocarcinoma Cell Line

Organism

Homo sapiens

Extracted molecule

total RNA

Description

This sample is part of a study that compares small sample amplification technologies. The analysis looks at differential gene expression when compared to one round of T7 amplification. A tumor cell line was used in comparison to a human reference RNA in this study.
Keywords = amplification
Keywords = small sample
Keywords = Affymetrix

Submission date

May 29, 2005

Last update date

Jun 02, 2005

Contact name

Chin-Yi Chu

E-mail(s)

chinyi_chu@urmc.rochester.edu

Phone

(585)273-2850

Organization name

University of Rochester

Department

Environmental Medicine

Lab

Functional Genomic Center

Street address

75 Elmwood Avenue

City

Rochester

State/province

ZIP/Postal code

14642

Country

USA

Platform ID

GPL571

Series (1)

GSE2723

Small Sample Amplification Technologies

Data table header descriptions
ID_REF
VALUE	RMA

Data table
ID_REF	VALUE
AFFX-BioB-5_at	579.5087198
AFFX-BioB-M_at	1245.972851
AFFX-BioB-3_at	988.3417612
AFFX-BioC-5_at	2103.662214
AFFX-BioC-3_at	1203.704839
AFFX-BioDn-5_at	3689.056662
AFFX-BioDn-3_at	6839.938874
AFFX-CreX-5_at	11410.62007
AFFX-CreX-3_at	12818.88886
AFFX-DapX-5_at	5.712606603
AFFX-DapX-M_at	5.529985108
AFFX-DapX-3_at	5.811376772
AFFX-LysX-5_at	6.238222234
AFFX-LysX-M_at	6.184799426
AFFX-LysX-3_at	5.758217167
AFFX-PheX-5_at	5.539169106
AFFX-PheX-M_at	5.143018294
AFFX-PheX-3_at	12.62681553
AFFX-ThrX-5_at	5.877615218
AFFX-ThrX-M_at	5.848917852

Total number of rows: 22277

Table truncated, full table size 496 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM52643.CEL.gz	3.2 Mb	(ftp)(http)	CEL
GSM52643.EXP.gz	370 b	(ftp)(http)	EXP