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GEO accession:
Sample GSM140869
Query DataSets for GSM140869
Status
Public on Jul 01, 2007
Title
HepG2 FA2
Sample type
RNA
Source name
HepG2 cells
Organism
Homo sapiens
Characteristics
HepG2 cells with stable lentiviral knockdown of JAM-A
Extracted molecule
total RNA
Extraction protocol
Rneasy kit
Label
Biotin
Label protocol
Affymetrix kit
Hybridization protocol
Affymetrix
Scan protocol
Affymetrix
Description
N/A
Data processing
D-Chip, PM/MM model with defaults
Submission date
Oct 18, 2006
Last update date
Apr 21, 2007
Contact name
Stephen A Duncan
E-mail(s)
duncanst@musc.edu
Phone
843-792-9104
Organization name
Medical University South Carolina
Department
Regenerative Medicine and Cell Biology
Lab
Duncan Lab
Street address
173 Ashley Avenue, BSB 6th Floor, Room 657A
City
Charleston
State/province
SC
ZIP/Postal code
29425
Country
USA
Platform ID
GPL571
Series (1)
GSE6080
JAM-A Knockdown in HepG2 Cells
Data table header descriptions
ID_REF
VALUE
D-CHIP Analysis
ABS_CALL
MAS
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
109.2
P
AFFX-BioB-M_at
163.4
P
AFFX-BioB-3_at
111.2
P
AFFX-BioC-5_at
360.8
P
AFFX-BioC-3_at
448.9
P
AFFX-BioDn-5_at
910.3
P
AFFX-BioDn-3_at
1571.2
P
AFFX-CreX-5_at
3923.9
P
AFFX-CreX-3_at
4690.6
P
AFFX-DapX-5_at
224.3
P
AFFX-DapX-M_at
477.8
P
AFFX-DapX-3_at
876.3
P
AFFX-LysX-5_at
20.9
P
AFFX-LysX-M_at
54.4
P
AFFX-LysX-3_at
132.8
P
AFFX-PheX-5_at
46.9
P
AFFX-PheX-M_at
71.9
P
AFFX-PheX-3_at
103
P
AFFX-ThrX-5_at
55.8
P
AFFX-ThrX-M_at
123.8
P
Total number of rows:
22277
Table truncated, full table size
383 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM140869.CEL.gz
1.8 Mb
(ftp)
(http)
CEL
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