NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM113817 Query DataSets for GSM113817
Status Public on Jun 14, 2006
Title GM15850 patient cells treated with FA1 at 1uM 2
Sample type RNA
 
Source name GM15850
Organism Homo sapiens
Characteristics GM15850 patient cells treated with FA1 at 1uM.
Biomaterial provider http://locus.umdnj.edu/nigms/nigms_cgi/display.cgi?GM15850
Coriell
Extracted molecule total RNA
Label Caltech core facility labeled
 
Description Normal and patient cells were treated with pyrrole-imidazole made to target GAA repeats.
Data processing RMAExpress and BRBArraytools
 
Submission date Jun 09, 2006
Last update date Aug 28, 2018
Contact name Ryan Stephen Burnett
E-mail(s) rburnett@scripps.edu
Phone 858-784-8920
Fax 858-784-8965
Organization name The Scripps Research Institute
Department Molecular Biology
Lab Gottesfeld
Street address 10550 N. Torrey Pines Road, MB-27
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platform ID GPL570
Series (1)
GSE5040 Polyamides alleviate transcription inhibition associated with long GAA•TTC repeats in Friedreich’s ataxia
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 312.8 P 0.000044
AFFX-BioB-M_at 480.7 P 0.000044
AFFX-BioB-3_at 318.4 P 0.000044
AFFX-BioC-5_at 916.8 P 0.000044
AFFX-BioC-3_at 1054.8 P 0.000044
AFFX-BioDn-5_at 1910 P 0.000044
AFFX-BioDn-3_at 3151.5 P 0.000044
AFFX-CreX-5_at 8375.6 P 0.000052
AFFX-CreX-3_at 9460.8 P 0.000044
AFFX-DapX-5_at 36.6 P 0.000169
AFFX-DapX-M_at 59.2 P 0.002275
AFFX-DapX-3_at 100.8 P 0.000044
AFFX-LysX-5_at 7.4 A 0.0727
AFFX-LysX-M_at 12.7 A 0.262827
AFFX-LysX-3_at 12.6 P 0.004017
AFFX-PheX-5_at 6.9 P 0.018281
AFFX-PheX-M_at 15.2 P 0.005561
AFFX-PheX-3_at 28.6 P 0.002556
AFFX-ThrX-5_at 14.6 A 0.287743
AFFX-ThrX-M_at 16.1 P 0.002023

Total number of rows: 54675

Table truncated, full table size 1378 Kbytes.




Supplementary file Size Download File type/resource
GSM113817.CEL.gz 7.3 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap