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Series GSE97650 Query DataSets for GSE97650
Status Public on Apr 18, 2017
Title Mural lymphatic endothelial cells regulate meningeal angiogenesis in the zebrafish
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary Analyse gene expression in mural lymphatic endothelial cells (muLECs)
 
Overall design Adult zebrafish brains were dissociated using Liberase and lyve1 Dsred postive cells FAC sorted into Trizol LS. RNA was extracted and amplified before sequencing. Samples were prepared in triplicate, with 6 brains used per samples.
 
Contributor(s) Bower NI, Hogan BM
Citation(s) 28459441
Submission date Apr 11, 2017
Last update date May 15, 2019
Contact name Othmar Korn
Organization name Australian Institute for Bioengineering and Nanotechnology
Street address University of Queensland
City St. Lucia
State/province Queensland
ZIP/Postal code 4067
Country Australia
 
Platforms (1)
GPL20828 Illumina NextSeq 500 (Danio rerio)
Samples (3)
GSM2574374 Adult wildtype zebrafish muLECs 1
GSM2574375 Adult wildtype zebrafish muLECs 2
GSM2574376 Adult wildtype zebrafish muLECs 3
Relations
BioProject PRJNA382557
SRA SRP103806

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE97650_gene_counts_muLEC.txt.gz 190.6 Kb (ftp)(http) TXT
GSE97650_yugene_abundance_muLEC.txt.gz 349.3 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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