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Series GSE84695 Query DataSets for GSE84695
Status Public on Jul 31, 2017
Title Exposure to mixture of Environmental endocrine disruptors induce miRNAs/isomiRs deregulation in mouse testis
Organism Mus musculus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Purpose: In testis the effects of exposure to mixtures of Endocrine disruptors compounds (EDCs) upon expression of miRNAs were not addressed.

Objective: To identify the expression profiles of the 'miRNome' in mice testis chronic exposed to a defined mixture of five EDCs.

Methods: Pregnant mice from 0.5 post-coital day were exposed in the drinking water to a mixture containing 0.3 mg/Kg-bw/day of each phthalate (DEHP, DBP, BBP), plus 0.05 mg/Kg-bw/day of each alkylphenol (NP, OP) until adulthood of male mouse (60 days old). We characterized the 'miRNome' by next generation sequence (NGS).

Results: In mouse testis exposed to EDCs mixture we detected by NGS 2 up-regulated and 8 down-regulated miRNAs along to 36 isomiRs differentially expressed; these results were validated by RT-qPCR. and functional analysis showed deregulation of testicular hormonal status, spermatogenesis disruption and germ cells apoptosis.

Conclusions: Here we provide the first association between deregulation of miRNAs, isomiRs, with histopathological and hormonal alterations in adult mice testis exposed to mixture of EDCs.
 
Overall design Testis snc-RNA profiles of 60-day old mice of control (mice drank water only with the dose of vehicles equivalents diluted) and exposed to EDCs mixture were generated by deep sequency using MiSeq-Illumina sequencer
 
Contributor(s) Buñay J, Larriba E, Moreno R, del Mazo J
Citation(s) 28611354
Submission date Jul 21, 2016
Last update date May 15, 2019
Contact name Julio Buñay Noboa
E-mail(s) julio.bunay@gmail.com
Phone +569-77973421
Organization name Pontificia Univerisidad Catolica de Chile
Department Physiology
Lab Endocrinology and reproduccion
Street address Alameda 340
City santiago
State/province Santiago
ZIP/Postal code 8331150
Country Chile
 
Platforms (1)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (2)
GSM2247758 Sample_Mixture_EDC_S1_L001_R1_001
GSM2247759 Sample_Control_S2_L001_R1_001
Relations
BioProject PRJNA330853
SRA SRP079224

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Supplementary file Size Download File type/resource
GSE84695_RAW.tar 80.0 Kb (http)(custom) TAR (of XLSX)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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