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Series GSE82097 Query DataSets for GSE82097
Status Public on Jun 30, 2016
Title Regulation of Tlx3 by Pax6 is required for the restricted expression of Chrnα3 in Cerebellar Granule Neuron progenitors during development
Organism Mus musculus
Experiment type Expression profiling by array
Summary Homeobox gene Tlx3 is known to promote glutamatergic differentiation and is expressed in post-mitotic neurons of CNS. Contrary to this here, we discovered that Tlx3 is expressed in the proliferating progenitors of the external granule layer in the cerebellum, and examined factors that regulate this expression. Using Pax6-/-Sey mouse model and molecular interaction studies we demonstrate Pax6 is a key activator of Tlx3 specifically in cerebellum, and induces its expression starting at embryonic day (E)15. By Postnatal day (PN)7, Tlx3 is expressed in a highly restricted manner in the cerebellar granule neurons of the posterior cerebellar lobes, where it is required for the restricted expression of nicotinic cholinergic receptor-α3 subunit (Chrnα3) and other genes involved in formation of synaptic connections and neuronal migration. These results demonstrate a novel role for Tlx3 and indicate that Pax6-Tlx3 expression and interaction is part of a region specific regulatory network in cerebellum and its deregulation during development could possibly lead to Autistic spectral disorders (ASD)
 
Overall design Anterior and posterior lobes of PN7 mouse cerebellum were isolated separately and differentially expressed genes were identified.
 
Contributor(s) Divya TS, Subashini C, Sanalkumar R, Dhanesh SB, Lalitha S, Parvathy S, Rasheed VA, Divya MS, James J
Citation(s) 27452274
Submission date Jun 01, 2016
Last update date Apr 19, 2019
Contact name madavan vasudevan
E-mail(s) madavan.vasudevan@gmail.com
Phone +91-9845093355
Organization name Theomics International Private Limited
Street address Kasturi Nagar
City Bangalore
State/province Karnataka
ZIP/Postal code 560043
Country India
 
Platforms (1)
GPL6887 Illumina MouseWG-6 v2.0 expression beadchip
Samples (4)
GSM2183442 Anterior_Rep1
GSM2183443 Posterior_Rep1
GSM2183444 Anterior_Rep2
Relations
BioProject PRJNA324002

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE82097_RAW.tar 15.8 Mb (http)(custom) TAR
GSE82097_Raw_Data.txt.gz 2.5 Mb (ftp)(http) TXT
Processed data included within Sample table

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