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| Status |
Public on Mar 08, 2016 |
| Title |
Lincomycin effect on PIFq-regulated transcriptome |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA-seq experiment of WT and pifq mutant seedlings grown for 3 days in darkness in presence or absence of Lincomycin.
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| |
|
| Overall design |
Transcriptome profiles of the wild-type (WT) and pif1pif3pif4pif5 (pifq) quadruple mutant seedlings grown for 3 days in the dark in presence or absence of Lincomycin. Biological triplicate samples were analyzed from libraries constructed using a 3'-capture, 5' to 3' directional method.
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| |
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| Contributor(s) |
Martín G, Monte E, Quail PH |
| Citation(s) |
27150909 |
| |
| Submission date |
Mar 07, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Guiomar Martín |
| E-mail(s) |
guiomar.martin@cragenomica.es
|
| Organization name |
Centre for Research in Agricultural Genomics
|
| Street address |
Vall Moronta
|
| City |
Cerdanyola del Vallès |
| State/province |
Barcelona |
| ZIP/Postal code |
08193 |
| Country |
Spain |
| |
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| Platforms (1) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
|
| Samples (12)
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| Relations |
| BioProject |
PRJNA314522 |
| SRA |
SRP071244 |
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