|
| Status |
Public on Oct 01, 2015 |
| Title |
Rice gene expression in irrigated and rainfed fields during two seasons |
| Organism |
Oryza sativa |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
To identify the concurrent effects of multiple environmental factors on gene expression under natural climatic fluctuations in rice, we examined global gene expression patterns in two fields typical of the main modes of rice cultivation, over two seasons, each comprising 15 time-points in three different genotypes
|
| |
|
| Overall design |
Two time-series of 15 time-points, one for each season (dry and wet) over two different fields
|
| |
|
| Contributor(s) |
Plessis A, Hafemeister C, Bonneau R, Purugganan M |
| Citation(s) |
26609814, 27655842 |
| |
| Submission date |
Sep 30, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Christoph Hafemeister |
| Organization name |
New York Genome Center
|
| Lab |
Satija Lab
|
| Street address |
101 Avenue of the Americas
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10013 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13160 |
Illumina HiSeq 2000 (Oryza sativa) |
|
| Samples (239)
|
|
| Relations |
| BioProject |
PRJNA297424 |
| SRA |
SRP064346 |
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