|
| Status |
Public on Apr 19, 2016 |
| Title |
PLZF & SALL4 ChIP-seq in undifferentiated spermatogonia |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Cultured THY1+ spermatogonia were used to reveal the genomic targets of PLZF and SALL4 in undifferentiated spermatogonia.
|
| |
|
| Overall design |
Three replicate preparations of DBA/2 mouse THY1+ spermatogonia were used for independent ChIP of PLZF and SALL4, NGS and MACS-based peak calling.
|
| |
|
| Contributor(s) |
Lovelace D, Gao Z, Song Y, Ruan J, Hermann B |
| Citation(s) |
27068105 |
| |
| Submission date |
Sep 24, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Brian P. Hermann |
| E-mail(s) |
Brian.Hermann@utsa.edu
|
| Phone |
210-458-8047
|
| Organization name |
University of Texas at San Antonio
|
| Department |
Department of Biology
|
| Street address |
1 UTSA Circle
|
| City |
San Antonio |
| State/province |
TX |
| ZIP/Postal code |
78249 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL11002 |
Illumina Genome Analyzer IIx (Mus musculus) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
|
| Samples (9)
|
|
| Relations |
| BioProject |
PRJNA296869 |
| SRA |
SRP064154 |
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